Gene: Solyc09g083080.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g083080.4
  • Transcript Identifier Solyc09g083080.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 64851402-64854874 : negative

Gene Family Information

  • ID HOM05D001386
  • #Genes/#Species 453/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g083080.4.1
  • uniprot A0A3Q7J2J4
  • gene_id Solyc09g083080

Descriptions

  • Description Nucleolar protein 58 (AHRD V3.3 *** A0A1U8GRC5_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030515
IBA
IEA
GOA DatabasesnoRNA binding
GO:0030515
IEA
InterProsnoRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031428
IBA
IEA
GOA Databasebox C/D RNP complex
GO:0031428
IEA
InterProbox C/D RNP complex
GO:0032040
IBA
IEA
GOA Databasesmall-subunit processome
GO:0032040
IEA
InterProsmall-subunit processome
GO:0005730
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012974 NOP5, N-terminal
IPR002687 Nop domain
IPR012976 NOSIC
IPR045056 Nucleolar protein Nop56/Nop58
IPR042239 Nop, C-terminal domain
IPR036070 Nop domain superfamily
Mapman id Description
17.1.1.2.1.5.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.snoRNP scaffold component Nop58