Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11280 Brassica napus
A07p26440 Brassica napus
A08p31660 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.2898 Anthoceros agrestis
Actinidia01797 Actinidia chinensis
Actinidia08969 Actinidia chinensis
Actinidia08970 Actinidia chinensis
Actinidia14364 Actinidia chinensis
Ah.01g006020 Amaranthus hybridus
Ah.01g021210 Amaranthus hybridus
AL1G27370 Arabidopsis lyrata
AL2G41540 Arabidopsis lyrata
Aqoxy7G01818 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QF777V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V93J5T Arachis hypogaea
AT1G15280 Arabidopsis thaliana
AT1G80000 Arabidopsis thaliana
ATR0037G010 Amborella trichopoda
Atru.chr1.3230 Acer truncatum
AUR62011620 Chenopodium quinoa
AUR62016435 Chenopodium quinoa
BcaB02g07299 Brassica carinata
BcaB03g13068 Brassica carinata
BcaC05g25465 Brassica carinata
BcaC07g38777 Brassica carinata
BcaC08g45284 Brassica carinata
BolC5t30078H Brassica oleracea
BolC6t38053H Brassica oleracea
BolC8t49334H Brassica oleracea
BraA06t24308Z Brassica rapa
BraA07t30288Z Brassica rapa
BraA08t35088Z Brassica rapa
C05p13410 Brassica napus
C06p28830 Brassica napus
C08p17080 Brassica napus
CAN.G438.56 Capsicum annuum
CANSAT56G0412 Cannabis sativa
CARHR015810 Cardamine hirsuta
CARHR074480 Cardamine hirsuta
Carub.0001s1504 Capsella rubella
Carub.0002s2751 Capsella rubella
Ca_20400_v3 Cicer arietinum L.
CBR_g19410 Chara braunii
CBR_g19411 Chara braunii
Cc04_g03550 Coffea canephora
CDE02G4492 Ceratophyllum demersum
CDE04G0005 Ceratophyllum demersum
Cfa002053 Carpinus fangiana
Cfa003282 Carpinus fangiana
Ciclev10002929m.g Citrus clementina
Ciclev10010311m.g Citrus clementina
Ciclev10024985m.g Citrus clementina
Ciclev10026979m.g Citrus clementina
Ciclev10033173m.g Citrus clementina
CiPaw.01G240300 Carya illinoinensis
CiPaw.02G152100 Carya illinoinensis
ClCG09G002280 Citrullus lanatus
COL.COLO4_30344 Corchorus olitorius
Cpa.g.sc67.13 Carica papaya
Cpa.g.sc67.14 Carica papaya
CsaV3_7G033030 Cucumis sativus L.
CSS0010012 Camellia sinensis var. sinensis
CSS0018769 Camellia sinensis var. sinensis
CSS0032206 Camellia sinensis var. sinensis
DCAR_000323 Daucus carota
DCAR_016225 Daucus carota
DCAR_021316 Daucus carota
Dinv30524 Davidia involucrata
Dinv38057 Davidia involucrata
Duzib160G0782 Durio zibethinus
Duzib192G0892 Durio zibethinus
Duzib235G1478 Durio zibethinus
ECA234G1424 Erigeron canadensis
ECA247G3305 Erigeron canadensis
EL10Ac9g21983 Beta vulgaris
Eucgr.F03010 Eucalyptus grandis
FAN02G4233 Fragaria x ananassa
FAN05G5709 Fragaria x ananassa
FAN09G0931 Fragaria x ananassa
FAN14G4821 Fragaria x ananassa
FvH4_6g30960 Fragaria vesca
Glyma.07G034600 Glycine max
Glyma.08G207400 Glycine max
Glyma.13G360400 Glycine max
Glyma.15G013500 Glycine max
Gohir.A02G122300 Gossypium hirsutum
Gohir.A05G127600 Gossypium hirsutum
Gohir.A09G084000 Gossypium hirsutum
Gohir.A10G079500 Gossypium hirsutum
Gohir.D03G074200 Gossypium hirsutum
Gohir.D05G128500 Gossypium hirsutum
Gohir.D09G083800 Gossypium hirsutum
Gohir.D10G072000 Gossypium hirsutum
Gorai.002G058500 Gossypium raimondii
Gorai.006G099800 Gossypium raimondii
Gorai.009G132700 Gossypium raimondii
Gorai.011G077400 Gossypium raimondii
GSVIVG01017130001 Vitis vinifera
HanXRQChr10g0314941 Helianthus annuus
HanXRQChr14g0455931 Helianthus annuus
Haze_16450 Corylus avellana
Haze_25690 Corylus avellana
Hma1.2p1_0090F.1_g045530 Hydrangea macrophylla
Hma1.2p1_0323F.1_g125250 Hydrangea macrophylla
Hma1.2p1_0323F.1_g125260 Hydrangea macrophylla
Hma1.2p1_0682F.1_g202700 Hydrangea macrophylla
HPP92_009103 Vanilla planifolia
Hund00605 Selenicereus undatus
Hund06603 Selenicereus undatus
Lalb_Chr14g0373491 Lupinus albus
Lalb_Chr22g0351191 Lupinus albus
Lalb_Chr24g0395781 Lupinus albus
Lj3g0018219 Lotus japonicus
Lj3g0021137 Lotus japonicus
Lj5C62G3 Lonicera japonica
Lj9A506T42 Lonicera japonica
Lj9C506T18 Lonicera japonica
Lsat_1_v5_gn_1_123760 Lactuca sativa
Lsat_1_v5_gn_2_108800 Lactuca sativa
Lsat_1_v5_gn_2_128241 Lactuca sativa
Lsat_1_v5_gn_2_1481 Lactuca sativa
Lsat_1_v5_gn_2_54100 Lactuca sativa
Lsat_1_v5_gn_3_118721 Lactuca sativa
Lsat_1_v5_gn_3_22201 Lactuca sativa
Lsat_1_v5_gn_4_107581 Lactuca sativa
Lsat_1_v5_gn_5_129921 Lactuca sativa
Lsat_1_v5_gn_5_171621 Lactuca sativa
Lsat_1_v5_gn_6_22701 Lactuca sativa
Lsat_1_v5_gn_7_106680 Lactuca sativa
Lsat_1_v5_gn_8_148940 Lactuca sativa
Lsat_1_v5_gn_8_71840 Lactuca sativa
Lsat_1_v5_gn_9_82241 Lactuca sativa
Manes.04G121800 Manihot esculenta
Manes.11G048500 Manihot esculenta
Mapoly0012s0166 Marchantia polymorpha
MBI01_g16637_MAGBIO Magnolia biondii
MD00G1201000 Malus domestica
MD09G1214900 Malus domestica
MD17G1197300 Malus domestica
MD17G1197400 Malus domestica
Medtr4g011920 Medicago truncatula
Migut.I00851 Erythranthe guttata
MSTRG.11085 Avicennia marina
MSTRG.4727 Avicennia marina
Nitab4.5_0000351g0170 Nicotiana tabacum
Nitab4.5_0002327g0040 Nicotiana tabacum
Nitab4.5_0003885g0080 Nicotiana tabacum
Nitab4.5_0006801g0040 Nicotiana tabacum
Nn2g11806 Nelumbo nucifera
Nn8g39252 Nelumbo nucifera
Oeu000441.3 Olea europaea
Oeu024064.1 Olea europaea
Oeu033489.1 Olea europaea
Oeu063973.3 Olea europaea
Os01g0595100 Oryza sativa ssp. japonica
Os01g0719400 Oryza sativa ssp. japonica
Os05g0534600 Oryza sativa ssp. japonica
Peaxi162Scf00015g00341 Petunia axillaris
Peaxi162Scf00207g00946 Petunia axillaris
PGR102G1309 Punica granatum
PGSC0003DMG401028616 Solanum tuberosum
PGSC0003DMG402002640 Solanum tuberosum
Phvul.005G172200 Phaseolus vulgaris
Phvul.010G151300 Phaseolus vulgaris
Potri.001G178900 Populus trichocarpa
Potri.001G178950 Populus trichocarpa
Potri.003G056500 Populus trichocarpa
Pp3c17_2620 Physcomitrium patens
Pp3c17_2626 Physcomitrium patens
Pp3c17_2630 Physcomitrium patens
Prupe.3G073300 Prunus persica
Psat7g253080 Pisum sativum
PSO063G5160 Papaver somniferum
PSO782G5747 Papaver somniferum
QL02p085909 Quercus lobata
QL05p025236 Quercus lobata
RcHm_v2.0_Chr2g0137581 Rosa chinensis
Rhsim08G0219800 Rhododendron simsii
Rhsim12G0197000 Rhododendron simsii
Sabra03G0031900 Salix brachista
Sc12g0009260 Simmondsia chinensis
Sed0009602 Sechium edule
Sed0012835 Sechium edule
SEGI_16629 Sequoiadendron giganteum
SGA_v2.0_scaffold117G32385 Striga asiatica
SGA_v2.0_scaffold279G46820 Striga asiatica
SHI24317 Sapria himalayana
Solyc03g120300.3 Solanum lycopersicum
Solyc12g042990.3 Solanum lycopersicum
Sopen03g039190 Solanum pennellii
Sopen12g022220 Solanum pennellii
Sp1g13590 Schrenkiella parvula
Sp5g35780 Schrenkiella parvula
TAR383G0973 Trochodendron aralioides
TAR624G0149 Trochodendron aralioides
TAR626G0726 Trochodendron aralioides
THA.LOC104800435 Tarenaya hassleriana
THA.LOC104812516 Tarenaya hassleriana
THA.LOC104813563 Tarenaya hassleriana
Thecc.06G084100 Theobroma cacao
Thhalv10007225m.g Eutrema salsugineum
Thhalv10018298m.g Eutrema salsugineum
TPR.G24188 Trifolium pratense
TWI12G0521 Tripterygium wilfordii
TWI18G0488 Tripterygium wilfordii
TWI75G0984 Tripterygium wilfordii
unitig_22.g5467 Utricularia gibba
unitig_8.g3892 Utricularia gibba
vmacro16945 Vaccinium macrocarpon
vmacro18925 Vaccinium macrocarpon
VMungo0331G1559 Vigna mungo
VMungo1080G1584 Vigna mungo
Zm00001eb161170 Zea mays
Zm00001eb293900 Zea mays
Zm00001eb353830 Zea mays
Zm00001eb357620 Zea mays

User provided reference genes

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