Gene: PGR102G1309

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G1309
  • Transcript Identifier PGR102G1309.01
  • Gene Type Coding gene
  • Location NC_045129.1 : 15044200-15048459 : positive

Gene Family Information

  • ID HOM05D003101
  • #Genes/#Species 221/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031386489.1
  • name LOC116199996
  • name XM_031530629.1
  • id gene-LOC116199996
  • uniprot A0A6P8CWT8

Descriptions

  • product protein MLN51 homolog, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0000184
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035145
IEA
GOA Databaseexon-exon junction complex
GO:0035145
IEA
InterProexon-exon junction complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G15280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018545 Btz domain
IPR044796 Protein MLN51 homolog, plant
Mapman id Description
17.3.1.1.4 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component CASC3