Gene: PGSC0003DMG401028616

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401028616
  • Transcript Identifier PGSC0003DMT400073671
  • Gene Type Coding gene
  • Location ST4.03ch12 : 50115199-50121486 : negative

Gene Family Information

  • ID HOM05D003101
  • #Genes/#Species 221/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37445610
  • id PGSC0003DMG401028616.v4.03
  • uniprot M1CSF5

Descriptions

  • Description Glycine-rich protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0000184
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035145
IEA
GOA Databaseexon-exon junction complex
GO:0035145
IEA
InterProexon-exon junction complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G15280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018545 Btz domain
IPR044796 Protein MLN51 homolog, plant
Mapman id Description
17.3.1.1.4 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component CASC3