Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03850 Brassica napus
A03p63050 Brassica napus
A08p16700 Brassica napus
Aa31LG2G15850 Aethionema arabicum
Aa31LG2G15860 Aethionema arabicum
Aa31LG2G15870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1496 Anthoceros agrestis
Actinidia02242 Actinidia chinensis
Actinidia27859 Actinidia chinensis
Ah.01g018980 Amaranthus hybridus
AL3G33820 Arabidopsis lyrata
AL7G16550 Arabidopsis lyrata
AL7G16560 Arabidopsis lyrata
Aqoxy6G02820 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18Z3WC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4JJ040 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7J56T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WP2HM7 Arachis hypogaea
AT4G34640 Arabidopsis thaliana
AT4G34650 Arabidopsis thaliana
ATR0693G049 Amborella trichopoda
Atru.chr10.1553 Acer truncatum
Atru.chr10.843 Acer truncatum
Atru.chr5.3122 Acer truncatum
Atru.chr5.3127 Acer truncatum
Atru.ctg942.20 Acer truncatum
Atru.ctg942.23 Acer truncatum
Atru.ctg942.24 Acer truncatum
AUR62010406 Chenopodium quinoa
AUR62016810 Chenopodium quinoa
AUR62016811 Chenopodium quinoa
BcaB01g03586 Brassica carinata
BcaB03g11822 Brassica carinata
BcaB04g19083 Brassica carinata
BcaC01g00888 Brassica carinata
BcaC05g28215 Brassica carinata
BcaNung00679 Brassica carinata
BcaNung00680 Brassica carinata
BcaNung04912 Brassica carinata
BcaNung04913 Brassica carinata
BcaNung07070 Brassica carinata
BolC1t00404H Brassica oleracea
BolC3t17375H Brassica oleracea
BolC3t17376H Brassica oleracea
BolC3t20850H Brassica oleracea
BolC7t46498H Brassica oleracea
BraA01t00371Z Brassica rapa
BraA01t00372Z Brassica rapa
BraA03t15379Z Brassica rapa
BraA03t15380Z Brassica rapa
BraA08t33635Z Brassica rapa
C01p04160 Brassica napus
C03p85620 Brassica napus
C07p60680 Brassica napus
CAN.G1161.7 Capsicum annuum
CAN.G170.88 Capsicum annuum
CANSAT11G0574 Cannabis sativa
CARHR096840 Cardamine hirsuta
CARHR096850 Cardamine hirsuta
CARHR242950 Cardamine hirsuta
Carub.0007s0563 Capsella rubella
Carub.0007s0564 Capsella rubella
Ca_20928_v3 Cicer arietinum L.
CBR_g25856 Chara braunii
Cc00_g22310 Coffea canephora
CDE02G0836 Ceratophyllum demersum
CDE06G2639 Ceratophyllum demersum
Cfa005093 Carpinus fangiana
Cfa026728 Carpinus fangiana
Ciclev10028537m.g Citrus clementina
CiPaw.05G072800 Carya illinoinensis
CiPaw.06G129300 Carya illinoinensis
ClCG11G003970 Citrullus lanatus
COL.COLO4_33787 Corchorus olitorius
Cpa.g.sc150.32 Carica papaya
Cpa.g.sc150.33 Carica papaya
Cpa.g.sc150.34 Carica papaya
Cre03.g175250 Chlamydomonas reinhardtii
CsaV3_2G015210 Cucumis sativus L.
CSS0006977 Camellia sinensis var. sinensis
CSS0031155 Camellia sinensis var. sinensis
DCAR_003647 Daucus carota
DCAR_021828 Daucus carota
Dinv23468 Davidia involucrata
Dinv42011 Davidia involucrata
Duzib052G0368 Durio zibethinus
Duzib132G1239 Durio zibethinus
Duzib248G1127 Durio zibethinus
ECA233G4387 Erigeron canadensis
ECA246G2861 Erigeron canadensis
ECA246G4281 Erigeron canadensis
ECA247G3171 Erigeron canadensis
EL10Ac9g21654 Beta vulgaris
EL10Ac9g21655 Beta vulgaris
Eucgr.B01607 Eucalyptus grandis
Eucgr.G01720 Eucalyptus grandis
FAN15G1692 Fragaria x ananassa
FAN20G0812 Fragaria x ananassa
FAN24G1032 Fragaria x ananassa
FAN27G1970 Fragaria x ananassa
FvH4_2g10131 Fragaria vesca
Glyma.11G112000 Glycine max
Glyma.12G038200 Glycine max
Gohir.A01G003622 Gossypium hirsutum
Gohir.A03G198400 Gossypium hirsutum
Gohir.D01G003500 Gossypium hirsutum
Gohir.D02G219800 Gossypium hirsutum
Gorai.002G004400 Gossypium raimondii
Gorai.005G247700 Gossypium raimondii
GSVIVG01024197001 Vitis vinifera
HanXRQChr10g0290101 Helianthus annuus
HanXRQChr15g0496421 Helianthus annuus
Haze_02272 Corylus avellana
Haze_02275 Corylus avellana
Haze_02278 Corylus avellana
HPP92_026971 Vanilla planifolia
Hund00223 Selenicereus undatus
Hund06271 Selenicereus undatus
Hund06272 Selenicereus undatus
Hund06273 Selenicereus undatus
Lalb_Chr01g0002201 Lupinus albus
Lalb_Chr23g0265211 Lupinus albus
Lj3g0009255 Lotus japonicus
Lj9A382T62 Lonicera japonica
Lsat_1_v5_gn_2_107100 Lactuca sativa
Lsat_1_v5_gn_4_67020 Lactuca sativa
Lsat_1_v5_gn_8_128660 Lactuca sativa
Manes.04G084600 Manihot esculenta
Manes.11G092100 Manihot esculenta
Mapoly0098s0008 Marchantia polymorpha
MBI14_g10725_MAGBIO Magnolia biondii
MBI16_g09355_MAGBIO Magnolia biondii
MBI16_g26593_MAGBIO Magnolia biondii
MCO07G150 Micromonas commoda
MD05G1056800 Malus domestica
MD10G1064900 Malus domestica
Medtr4g071520 Medicago truncatula
MELO3C023346.2 Cucumis melo
Migut.B00185 Erythranthe guttata
Migut.N01273 Erythranthe guttata
MSTRG.16843 Avicennia marina
MSTRG.27678 Avicennia marina
Nitab4.5_0000016g0060 Nicotiana tabacum
Nitab4.5_0000991g0060 Nicotiana tabacum
Nitab4.5_0001317g0110 Nicotiana tabacum
Nitab4.5_0002723g0060 Nicotiana tabacum
Nitab4.5_0006768g0020 Nicotiana tabacum
Nitab4.5_0007444g0020 Nicotiana tabacum
Nitab4.5_0009169g0050 Nicotiana tabacum
Nitab4.5_0012131g0010 Nicotiana tabacum
Nn6g32217 Nelumbo nucifera
Oeu004823.4 Olea europaea
Oeu008580.1 Olea europaea
Oeu036639.1 Olea europaea
Oeu055624.1 Olea europaea
Os03g0805100 Oryza sativa ssp. japonica
Os07g0200700 Oryza sativa ssp. japonica
Peaxi162Scf00003g00613 Petunia axillaris
Peaxi162Scf00003g04242 Petunia axillaris
Peaxi162Scf00016g00152 Petunia axillaris
Peaxi162Scf00285g00432 Petunia axillaris
PGR142G1569 Punica granatum
PGR142G2319 Punica granatum
PGR142G3150 Punica granatum
PGR142G3754 Punica granatum
PGR142G4391 Punica granatum
PGSC0003DMG400003408 Solanum tuberosum
PGSC0003DMG400039005 Solanum tuberosum
Phvul.003G243600 Phaseolus vulgaris
Phvul.011G040100 Phaseolus vulgaris
Potri.004G161200 Populus trichocarpa
Potri.009G123100 Populus trichocarpa
Pp3c3_33160 Physcomitrium patens
Pp3c4_2410 Physcomitrium patens
Pp3c5_23820 Physcomitrium patens
PRCOL_00002308 Prasinoderma coloniale
Prupe.8G087000 Prunus persica
Psat7g182120 Pisum sativum
PSO343G0001 Papaver somniferum
PSO541G5058 Papaver somniferum
PSO675G8714 Papaver somniferum
QL11p045849 Quercus lobata
RcHm_v2.0_Chr6g0267271 Rosa chinensis
Rhsim05G0068700 Rhododendron simsii
Sabra04G0108100 Salix brachista
Sabra09G0094600 Salix brachista
Sabra09G0094700 Salix brachista
Sabra09G0094800 Salix brachista
SalBow3G1575 Salvia bowleyana
SalBow6G5035 Salvia bowleyana
Sc08g0000800 Simmondsia chinensis
Sed0003806 Sechium edule
Sed0017571 Sechium edule
SEGI_17422 Sequoiadendron giganteum
SEGI_26892 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20473 Striga asiatica
SHI05597 Sapria himalayana
SMO137G0119 Selaginella moellendorffii
Solyc01g110290.3 Solanum lycopersicum
Solyc10g054130.3 Solanum lycopersicum
Solyc10g079040.3 Solanum lycopersicum
Solyc10g079060.2 Solanum lycopersicum
Sopen01g052440 Solanum pennellii
Sopen10g023990 Solanum pennellii
Sopen10g029680 Solanum pennellii
Sopen10g029700 Solanum pennellii
Sp7g32430 Schrenkiella parvula
Sp7g32440 Schrenkiella parvula
TAR376G1015 Trochodendron aralioides
TAR381G0344 Trochodendron aralioides
TAR628G0117 Trochodendron aralioides
THA.LOC104804345 Tarenaya hassleriana
THA.LOC104819625 Tarenaya hassleriana
Thecc.02G076900 Theobroma cacao
Thhalv10025338m.g Eutrema salsugineum
Thhalv10025392m.g Eutrema salsugineum
TPR.G16219 Trifolium pratense
TWI31G0458 Tripterygium wilfordii
TWI79G0151 Tripterygium wilfordii
vmacro02062 Vaccinium macrocarpon
vmacro17433 Vaccinium macrocarpon
VMungo1127G0062 Vigna mungo
Zm00001eb061440 Zea mays
Zm00001eb212630 Zea mays

User provided reference genes

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