Gene: Zm00001eb061440

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb061440
  • Transcript Identifier Zm00001eb061440_T001
  • Gene Type Coding gene
  • Location 1 : 297023122-297031262 : positive

Gene Family Information

  • ID HOM05D002898
  • #Genes/#Species 238/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb061440_T001
  • pid Zm00001eb061440_P001
  • uniprot A0A1D6L8B4
  • uniprot C0PE41
  • uniprot A0A1D6L8B1
  • uniprot A0A317YBW1
  • uniprot A0A1D6L8A9
  • uniprot B4FP16
  • uniprot A0A1D6L8A6
  • uniprot A0A1D6L8A7
  • uniprot B4F9F4
  • uniprot A0A1D6L8A5
  • V4_identifier Zm00001d034516

Descriptions

  • Description Zm00001e006060
  • Description Squalene synthase 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045338
IBA
GOA Databasefarnesyl diphosphate metabolic process
GO:0016126
ISO
PLAZA Integrative Orthologysterol biosynthetic process AT4G34640
GO:0008610
IEA
GOA Databaselipid biosynthetic process
GO:0008610
IEA
InterProlipid biosynthetic process
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004310
IBA
IEA
GOA Databasefarnesyl-diphosphate farnesyltransferase activity
GO:0004310
IEA
InterProfarnesyl-diphosphate farnesyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity
GO:0004311
IEA
GOA Databasefarnesyltranstransferase activity
GO:0004311
IEA
InterProfarnesyltranstransferase activity
GO:0016767
IEA
GOA Databasegeranylgeranyl-diphosphate geranylgeranyltransferase activity
GO:0051996
IBA
GOA Databasesqualene synthase activity
GO:0016765
IEA
GOA Databasetransferase activity, transferring alkyl or aryl (other than methyl) groups

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G34640
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G34640
GO:0005789
IBA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044844 Trans-isoprenyl diphosphate synthases, eukaryotic-type
IPR002060 Squalene/phytoene synthase
IPR006449 Squalene synthase-like
IPR033904 Trans-isoprenyl diphosphate synthases, head-to-head
IPR008949 Isoprenoid synthase domain superfamily
Mapman id Description
9.1.5.1 Secondary metabolism.terpenoids.cycloartenol biosynthesis.squalene synthase