Gene: Cc00_g22310

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g22310
  • Transcript Identifier Cc00_g22310.1
  • Gene Type Coding gene
  • Location chr0 : 141499653-141504502 : positive

Gene Family Information

  • ID HOM05D002898
  • #Genes/#Species 238/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB G0TEG7
  • UniProtKB P53800
  • UniProtKB D3K178
  • UniProtKB P53799
  • UniProtKB C9WKP7
  • UniProtKB Q54DR1
  • id GSCOCG00013343001

Descriptions

  • Description Squalene synthase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009058
IEA
InterProbiosynthetic process
GO:0008610
IEA
InterProlipid biosynthetic process
GO:0016126
ISO
PLAZA Integrative Orthologysterol biosynthetic process AT4G34640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
InterProtransferase activity
GO:0004310
IEA
InterProfarnesyl-diphosphate farnesyltransferase activity
GO:0004311
IEA
InterProfarnesyltranstransferase activity
GO:0051996
ISO
PLAZA Integrative Orthologysqualene synthase activity AT4G34640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005789
ISO
PLAZA Integrative Orthologyendoplasmic reticulum membrane AT4G34640
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G34640
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G34640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008949 Isoprenoid synthase domain superfamily
IPR002060 Squalene/phytoene synthase
IPR006449 Squalene synthase-like
IPR044844 Trans-isoprenyl diphosphate synthases, eukaryotic-type
IPR033904 Trans-isoprenyl diphosphate synthases, head-to-head
Mapman id Description
9.1.5.1 Secondary metabolism.terpenoids.cycloartenol biosynthesis.squalene synthase