Gene: Os03g0805100

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os03g0805100
  • Transcript Identifier Os03t0805100-01
  • Gene Type Coding gene
  • Location chr03 : 33605595-33611945 : positive

Gene Family Information

  • ID HOM05D002898
  • #Genes/#Species 238/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os03t0805100-01
  • MSU-ID LOC_Os03g59040.1
  • MSU-ID LOC_Os03g59040.2
  • uniprot O22105

Descriptions

  • Description Similar to Squalene synthase (EC 2.5.1.21).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045338
IBA
GOA Databasefarnesyl diphosphate metabolic process
GO:0016126
ISO
PLAZA Integrative Orthologysterol biosynthetic process AT4G34640
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process
GO:0008610
IEA
GOA Databaselipid biosynthetic process
GO:0008610
IEA
InterProlipid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity
GO:0004310
IBA
IEA
GOA Databasefarnesyl-diphosphate farnesyltransferase activity
GO:0004310
IEA
InterProfarnesyl-diphosphate farnesyltransferase activity
GO:0004311
IEA
GOA Databasefarnesyltranstransferase activity
GO:0004311
IEA
InterProfarnesyltranstransferase activity
GO:0016767
IEA
GOA Databasegeranylgeranyl-diphosphate geranylgeranyltransferase activity
GO:0051996
IBA
GOA Databasesqualene synthase activity
GO:0016765
IEA
GOA Databasetransferase activity, transferring alkyl or aryl (other than methyl) groups

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G34640
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G34640
GO:0005789
IBA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008949 Isoprenoid synthase domain superfamily
IPR044844 Trans-isoprenyl diphosphate synthases, eukaryotic-type
IPR006449 Squalene synthase-like
IPR002060 Squalene/phytoene synthase
IPR033904 Trans-isoprenyl diphosphate synthases, head-to-head
Mapman id Description
9.1.5.1 Secondary metabolism.terpenoids.cycloartenol biosynthesis.squalene synthase