Gene: Rhsim05G0068700
General Information
Structural Information
- Species Rhododendron simsii
- Gene Identifier Rhsim05G0068700
- Transcript Identifier Rhsim05G0068700.1
- Gene Type Coding gene
- Location chr05 : 9402204-9411365 : negative
Gene Family Information
- ID HOM05D002898
- #Genes/#Species 238/98
- Phylogenetic origin
- ID ORTHO05D003424
- #Genes/#Species 224/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Rhsim05G0068700.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009058 | IEA | InterPro | biosynthetic process | |
| GO:0008610 | IEA | InterPro | lipid biosynthetic process | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0016126 | ISO | PLAZA Integrative Orthology | sterol biosynthetic process | AT4G34640 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016740 | IEA | InterPro | transferase activity | |
| GO:0004310 | IEA | InterPro | farnesyl-diphosphate farnesyltransferase activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0004311 | IEA | InterPro | farnesyltranstransferase activity | |
| GO:0051996 | ISO | PLAZA Integrative Orthology | squalene synthase activity | AT4G34640 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005789 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum membrane | AT4G34640 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT4G34640 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G34640 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002060 | Squalene/phytoene synthase |
| IPR006449 | Squalene synthase-like |
| IPR001471 | AP2/ERF domain |
| IPR008949 | Isoprenoid synthase domain superfamily |
| IPR016177 | DNA-binding domain superfamily |
| IPR044844 | Trans-isoprenyl diphosphate synthases, eukaryotic-type |
| IPR033904 | Trans-isoprenyl diphosphate synthases, head-to-head |
| Mapman id | Description |
|---|---|
| 9.1.5.1 | Secondary metabolism.terpenoids.cycloartenol biosynthesis.squalene synthase |