Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29090 Brassica napus
A09p28550 Brassica napus
Aa31LG4G17930 Aethionema arabicum
Aa31LG6G7390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1788 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.788 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.789 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.791 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.308 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.309 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1075 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1076 Anthoceros agrestis
Actinidia01665 Actinidia chinensis
Actinidia16891 Actinidia chinensis
Actinidia16892 Actinidia chinensis
Actinidia35499 Actinidia chinensis
Ah.05g168620 Amaranthus hybridus
AL6G43890 Arabidopsis lyrata
AL6G44740 Arabidopsis lyrata
AL6G44760 Arabidopsis lyrata
Aqoxy2G01354 Aquilegia oxysepala
Aqoxy5G01998 Aquilegia oxysepala
Aqoxy5G02766 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CVX4HS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LDJL5U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UZXX9P Arachis hypogaea
AT4G10670 Arabidopsis thaliana
AT4G10710 Arabidopsis thaliana
ATR0787G014 Amborella trichopoda
ATR0787G187 Amborella trichopoda
ATR0982G001 Amborella trichopoda
Atru.chr12.1599 Acer truncatum
Atru.chr12.1600 Acer truncatum
Atru.chr2.1956 Acer truncatum
AUR62000451 Chenopodium quinoa
AUR62006799 Chenopodium quinoa
AUR62023624 Chenopodium quinoa
BcaB01g01504 Brassica carinata
BcaB05g22668 Brassica carinata
BcaB05g23889 Brassica carinata
BcaC01g04665 Brassica carinata
BcaC04g21061 Brassica carinata
BolC3t15827H Brassica oleracea
BolC9t56451H Brassica oleracea
BraA03t12104Z Brassica rapa
BraA09t38416Z Brassica rapa
C03p35150 Brassica napus
C09p36110 Brassica napus
CAN.G1110.39 Capsicum annuum
CAN.G1374.11 Capsicum annuum
CAN.G1374.12 Capsicum annuum
CAN.G422.22 Capsicum annuum
CANSAT54G2192 Cannabis sativa
CANSAT54G2357 Cannabis sativa
CARHR255890 Cardamine hirsuta
Carub.0006s2948 Capsella rubella
Ca_17066_v3 Cicer arietinum L.
CBR_g88538 Chara braunii
CBR_g88540 Chara braunii
Cc02_g35560 Coffea canephora
Cc02_g35610 Coffea canephora
CDE01G0203 Ceratophyllum demersum
CDE12G0244 Ceratophyllum demersum
Cfa006743 Carpinus fangiana
Cfa006744 Carpinus fangiana
Cfa024129 Carpinus fangiana
Ciclev10010951m.g Citrus clementina
Ciclev10010953m.g Citrus clementina
CiPaw.07G034300 Carya illinoinensis
CiPaw.07G034600 Carya illinoinensis
CiPaw.07G034700 Carya illinoinensis
ClCG01G025060 Citrullus lanatus
COL.COLO4_05501 Corchorus olitorius
COL.COLO4_15580 Corchorus olitorius
COL.COLO4_21600 Corchorus olitorius
Cpa.g.sc48.210 Carica papaya
Cre12.g540076 Chlamydomonas reinhardtii
CsaV3_6G052250 Cucumis sativus L.
CSS0002222 Camellia sinensis var. sinensis
CSS0002490 Camellia sinensis var. sinensis
CSS0026403 Camellia sinensis var. sinensis
CSS0028187 Camellia sinensis var. sinensis
CSS0032488 Camellia sinensis var. sinensis
CSS0036652 Camellia sinensis var. sinensis
DCAR_001896 Daucus carota
DCAR_005261 Daucus carota
DCAR_005263 Daucus carota
DCAR_005264 Daucus carota
DCAR_029800 Daucus carota
Dinv24498 Davidia involucrata
Dinv24499 Davidia involucrata
Dinv30930 Davidia involucrata
Dinv30931 Davidia involucrata
Duzib106G1569 Durio zibethinus
Duzib128G0933 Durio zibethinus
Duzib177G0327 Durio zibethinus
ECA233G1560 Erigeron canadensis
ECA233G3775 Erigeron canadensis
ECA236G2649 Erigeron canadensis
EL10Ac4g09533 Beta vulgaris
Eucgr.J01613 Eucalyptus grandis
FAN03G3220 Fragaria x ananassa
FAN05G4449 Fragaria x ananassa
FAN09G3252 Fragaria x ananassa
FAN12G2173 Fragaria x ananassa
FAN12G2854 Fragaria x ananassa
FAN14G5654 Fragaria x ananassa
FAN15G0623 Fragaria x ananassa
FAN15G3601 Fragaria x ananassa
FAN16G3225 Fragaria x ananassa
FAN19G3179 Fragaria x ananassa
FAN26G2915 Fragaria x ananassa
FAN27G2397 Fragaria x ananassa
FAN28G0446 Fragaria x ananassa
FAN28G2210 Fragaria x ananassa
FvH4_1g19730 Fragaria vesca
FvH4_6g08280 Fragaria vesca
Glyma.11G210335 Glycine max
Glyma.11G210662 Glycine max
Glyma.18G044500 Glycine max
Glyma.18G044600 Glycine max
Gohir.A11G275000 Gossypium hirsutum
Gohir.A13G177300 Gossypium hirsutum
Gohir.A13G177333 Gossypium hirsutum
Gohir.A13G177366 Gossypium hirsutum
Gohir.A13G177400 Gossypium hirsutum
Gohir.D11G285400 Gossypium hirsutum
Gohir.D13G183900 Gossypium hirsutum
Gohir.D13G184000 Gossypium hirsutum
Gorai.007G308600 Gossypium raimondii
Gorai.013G209200 Gossypium raimondii
Gorai.013G209300 Gossypium raimondii
GSVIVG01031306001 Vitis vinifera
GSVIVG01031308001 Vitis vinifera
HanXRQChr08g0226551 Helianthus annuus
HanXRQChr17g0566151 Helianthus annuus
Haze_04012 Corylus avellana
Haze_04013 Corylus avellana
Hma1.2p1_1243F.1_g269959 Hydrangea macrophylla
Hma1.2p1_1553F.1_g290360 Hydrangea macrophylla
HPP92_006044 Vanilla planifolia
Hund07285 Selenicereus undatus
Hund07287 Selenicereus undatus
Lalb_Chr15g0085281 Lupinus albus
Lalb_Chr18g0053751 Lupinus albus
Lalb_Chr20g0117101 Lupinus albus
Lj1g0018863 Lotus japonicus
Lj5C321T11 Lonicera japonica
Lj5C321T4 Lonicera japonica
Lj6g0001510 Lotus japonicus
Lju99C8T4 Lonicera japonica
Lsat_1_v5_gn_6_13361 Lactuca sativa
Manes.04G151800 Manihot esculenta
Manes.04G151900 Manihot esculenta
Manes.08G108300 Manihot esculenta
Mapoly0002s0004 Marchantia polymorpha
MBI03_g27157_MAGBIO Magnolia biondii
MBI05_g16450_MAGBIO Magnolia biondii
MBI05_g32236_MAGBIO Magnolia biondii
MBI15_g33084_MAGBIO Magnolia biondii
MBI17_g12239_MAGBIO Magnolia biondii
MCO01G522 Micromonas commoda
MD04G1188700 Malus domestica
MD04G1188800 Malus domestica
MD12G1201500 Malus domestica
MD12G1201600 Malus domestica
Medtr3g064470 Medicago truncatula
Medtr6g009500 Medicago truncatula
MELO3C007085.2 Cucumis melo
Migut.B00861 Erythranthe guttata
Migut.N00964 Erythranthe guttata
MSTRG.16417 Avicennia marina
MSTRG.27916 Avicennia marina
Nitab4.5_0002783g0010 Nicotiana tabacum
Nitab4.5_0002783g0060 Nicotiana tabacum
Nitab4.5_0005558g0040 Nicotiana tabacum
Nitab4.5_0009690g0010 Nicotiana tabacum
Nn3g18368 Nelumbo nucifera
Oeu000083.1 Olea europaea
Oeu060659.1 Olea europaea
Oeu061926.1 Olea europaea
Os04g0321600 Oryza sativa ssp. japonica
Os08g0404350 Oryza sativa ssp. japonica
Os12g0446500 Oryza sativa ssp. japonica
Peaxi162Scf00020g00229 Petunia axillaris
Peaxi162Scf00357g00047 Petunia axillaris
PGR042G3655 Punica granatum
PGSC0003DMG400018250 Solanum tuberosum
PGSC0003DMG400018294 Solanum tuberosum
PGSC0003DMG400025001 Solanum tuberosum
Phvul.006G086400 Phaseolus vulgaris
Phvul.006G086500 Phaseolus vulgaris
Potri.005G005000 Populus trichocarpa
Potri.005G005300 Populus trichocarpa
Potri.013G004500 Populus trichocarpa
Potri.013G004600 Populus trichocarpa
Pp3c13_15990 Physcomitrium patens
PRCOL_00002176 Prasinoderma coloniale
Prupe.6G306600 Prunus persica
Prupe.6G306700 Prunus persica
Psat3g019760 Pisum sativum
Psat5g142680 Pisum sativum
PSO013G0270 Papaver somniferum
PSO013G0325 Papaver somniferum
PSO017G1336 Papaver somniferum
PSO017G3664 Papaver somniferum
PSO017G4850 Papaver somniferum
PSO017G5415 Papaver somniferum
PSO063G0368 Papaver somniferum
PSO063G1701 Papaver somniferum
PSO063G1840 Papaver somniferum
PSO063G2261 Papaver somniferum
PSO063G2545 Papaver somniferum
PSO063G3323 Papaver somniferum
PSO063G4753 Papaver somniferum
PSO063G5500 Papaver somniferum
PSO063G6717 Papaver somniferum
PSO063G7015 Papaver somniferum
PSO170G0832 Papaver somniferum
PSO170G1264 Papaver somniferum
PSO170G4901 Papaver somniferum
PSO170G5873 Papaver somniferum
PSO170G6045 Papaver somniferum
PSO198G0020 Papaver somniferum
PSO198G0087 Papaver somniferum
PSO339G6101 Papaver somniferum
PSO384G0740 Papaver somniferum
PSO384G2224 Papaver somniferum
PSO384G4175 Papaver somniferum
PSO409G0015 Papaver somniferum
PSO478G4942 Papaver somniferum
PSO513G0174 Papaver somniferum
PSO541G1178 Papaver somniferum
PSO541G3798 Papaver somniferum
PSO541G4031 Papaver somniferum
PSO541G5861 Papaver somniferum
PSO675G3876 Papaver somniferum
PSO676G0006 Papaver somniferum
PSO676G0011 Papaver somniferum
PSO729G0149 Papaver somniferum
PSO782G3379 Papaver somniferum
QL03p009293 Quercus lobata
QL11p000167 Quercus lobata
RcHm_v2.0_Chr2g0111311 Rosa chinensis
RcHm_v2.0_Chr3g0458161 Rosa chinensis
RcHm_v2.0_Chr3g0460191 Rosa chinensis
Rhsim02G0164100 Rhododendron simsii
Rhsim02G0168200 Rhododendron simsii
Rhsim11G0099800 Rhododendron simsii
Rhsim11G0099900 Rhododendron simsii
Sabra05G0001800 Salix brachista
Sabra05G0015800 Salix brachista
Sabra05G0015900 Salix brachista
Sabra13G0003700 Salix brachista
Sabra13G0003800 Salix brachista
SalBow5G1230 Salvia bowleyana
SalBow7G1041 Salvia bowleyana
SalBow7G2750 Salvia bowleyana
Sc16g0009300 Simmondsia chinensis
Sed0012617 Sechium edule
Sed0013603 Sechium edule
SEGI_03780 Sequoiadendron giganteum
SEGI_06109 Sequoiadendron giganteum
SEGI_06840 Sequoiadendron giganteum
SEGI_07934 Sequoiadendron giganteum
SEGI_08578 Sequoiadendron giganteum
SEGI_08634 Sequoiadendron giganteum
SEGI_10285 Sequoiadendron giganteum
SEGI_11303 Sequoiadendron giganteum
SEGI_17002 Sequoiadendron giganteum
SEGI_18458 Sequoiadendron giganteum
SEGI_20126 Sequoiadendron giganteum
SEGI_20406 Sequoiadendron giganteum
SEGI_20604 Sequoiadendron giganteum
SEGI_20969 Sequoiadendron giganteum
SEGI_21678 Sequoiadendron giganteum
SEGI_24805 Sequoiadendron giganteum
SEGI_25948 Sequoiadendron giganteum
SEGI_26375 Sequoiadendron giganteum
SEGI_29195 Sequoiadendron giganteum
SEGI_29617 Sequoiadendron giganteum
SEGI_30495 Sequoiadendron giganteum
SEGI_35500 Sequoiadendron giganteum
SEGI_38195 Sequoiadendron giganteum
SEGI_40700 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30153 Striga asiatica
SGA_v2.0_scaffold199G41166 Striga asiatica
SGA_v2.0_scaffold45G17012 Striga asiatica
SHI18025 Sapria himalayana
SMO118G0095 Selaginella moellendorffii
Solyc01g101020.4 Solanum lycopersicum
Solyc01g101030.4 Solanum lycopersicum
Solyc10g006770.4 Solanum lycopersicum
Sopen01g044480 Solanum pennellii
Sopen01g044490 Solanum pennellii
Sopen10g002690 Solanum pennellii
Sp6g06780 Schrenkiella parvula
TAR365G0482 Trochodendron aralioides
TAR365G0538 Trochodendron aralioides
TAR365G0965 Trochodendron aralioides
TAR365G0980 Trochodendron aralioides
THA.LOC104815267 Tarenaya hassleriana
Thecc.05G327600 Theobroma cacao
Thecc.05G327700 Theobroma cacao
Thhalv10028377m.g Eutrema salsugineum
TPR.G26661 Trifolium pratense
TPR.G26670 Trifolium pratense
TWI32G0544 Tripterygium wilfordii
TWI34G1342 Tripterygium wilfordii
unitig_52.g17416 Utricularia gibba
unitig_62.g23641 Utricularia gibba
vmacro23464 Vaccinium macrocarpon
VMungo0540G0662 Vigna mungo
Zm00001eb229990 Zea mays

User provided reference genes

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