Gene: COL.COLO4_05501

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05501
  • Transcript Identifier COL.rna4322
  • Gene Type Coding gene
  • Location AWUE01012366.1 : 26887-30099 : positive

Gene Family Information

  • ID HOM05D001642
  • #Genes/#Species 393/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4322
  • GenBank OMP09388.1
  • id gene5473
  • gene_name COLO4_05501
  • uniprot A0A1R3KQT0

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT4G10710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035101
IEA
GOA DatabaseFACT complex
GO:0035101
IEA
InterProFACT complex
GO:0005694
IEA
GOA Databasechromosome
GO:0005634
IEA
GOA Databasenucleus
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT4G10710
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G10710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013719 Domain of unknown function DUF1747
IPR029148 FACT complex subunit Spt16, N-terminal lobe domain
IPR013953 FACT complex subunit Spt16 domain
IPR036005 Creatinase/aminopeptidase-like
IPR033825 FACT complex subunit Spt16, peptidase M24-like domain
IPR040258 FACT complex subunit Spt16
IPR011993 PH-like domain superfamily
IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal
IPR000994 Peptidase M24
Mapman id Description
12.2.2.1 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.component SPT16