Gene: Potri.005G005000

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.005G005000
  • Transcript Identifier Potri.005G005000.1
  • Gene Type Coding gene
  • Location Chr05 : 392530-395951 : positive

Gene Family Information

  • ID HOM05D001642
  • #Genes/#Species 393/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.005G005000.v4.1
  • pacid 42805068
  • synonym GTC901

Descriptions

  • Description PF00557//PF08512//PF08644//PF14826 - Metallopeptidase family M24 (Peptidase_M24) // Histone chaperone Rttp106-like (Rtt106) // FACT complex subunit (SPT16/CDC68) (SPT16) // FACT complex subunit SPT16 N-terminal lobe domain (FACT-Spt16_Nlob)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT4G10710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035101
IEA
InterProFACT complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G10710
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT4G10710
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G10710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013953 FACT complex subunit Spt16 domain
IPR013719 Domain of unknown function DUF1747
IPR036005 Creatinase/aminopeptidase-like
IPR011993 PH-like domain superfamily
IPR040258 FACT complex subunit Spt16
IPR000994 Peptidase M24
IPR029148 FACT complex subunit Spt16, N-terminal lobe domain
IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal
IPR033825 FACT complex subunit Spt16, peptidase M24-like domain
Mapman id Description
12.2.2.1 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.component SPT16