Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20600 Brassica napus
A03p37360 Brassica napus
A04p28460 Brassica napus
A05p08640 Brassica napus
A05p37440 Brassica napus
Aa31LG3G5600 Aethionema arabicum
Aa31LG9G15760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.51 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1786 Anthoceros agrestis
Actinidia30546 Actinidia chinensis
Ah.07g204280 Amaranthus hybridus
Ah.13g070940 Amaranthus hybridus
Ah.13g075500 Amaranthus hybridus
AL3G23530 Arabidopsis lyrata
AL4G33650 Arabidopsis lyrata
Aqoxy1G00457 Aquilegia oxysepala
Aqoxy2G00523 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LWV2XW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9EW5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9NTH3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTTL5P Arachis hypogaea
AT2G37270 Arabidopsis thaliana
AT3G11940 Arabidopsis thaliana
ATR0737G014 Amborella trichopoda
ATR1101G108 Amborella trichopoda
Atru.chr1.1536 Acer truncatum
Atru.chr8.1234 Acer truncatum
AUR62004565 Chenopodium quinoa
AUR62005958 Chenopodium quinoa
AUR62015279 Chenopodium quinoa
AUR62028108 Chenopodium quinoa
AUR62032727 Chenopodium quinoa
AUR62033617 Chenopodium quinoa
BcaB01g03784 Brassica carinata
BcaB02g09295 Brassica carinata
BcaB04g21109 Brassica carinata
BcaC01g04071 Brassica carinata
BcaC02g07534 Brassica carinata
BcaC02g11846 Brassica carinata
BcaC09g48185 Brassica carinata
BolC1t05279H Brassica oleracea
BolC3t14813H Brassica oleracea
BolC3t16802H Brassica oleracea
BolC4t22667H Brassica oleracea
BolC4t22695H Brassica oleracea
BolC4t22705H Brassica oleracea
BolC4t22731H Brassica oleracea
BolC4t28080H Brassica oleracea
BolC5t31252H Brassica oleracea
BolC5t34268H Brassica oleracea
BraA01t04150Z Brassica rapa
BraA02t09350Z Brassica rapa
BraA03t11302Z Brassica rapa
BraA03t12897Z Brassica rapa
BraA04t18324Z Brassica rapa
BraA05t19832Z Brassica rapa
BraA05t22542Z Brassica rapa
C03p24200 Brassica napus
C03p45360 Brassica napus
C04p10730 Brassica napus
C04p65760 Brassica napus
C04p65770 Brassica napus
C05p56010 Brassica napus
CAN.G960.43 Capsicum annuum
CANSAT35G0029 Cannabis sativa
CANSAT54G0372 Cannabis sativa
CANSAT54G0686 Cannabis sativa
CARHR049320 Cardamine hirsuta
CARHR052520 Cardamine hirsuta
CARHR086480 Cardamine hirsuta
CARHR132320 Cardamine hirsuta
Carub.0003s1126 Capsella rubella
Carub.0004s1918 Capsella rubella
Ca_00170_v3 Cicer arietinum L.
Ca_00568_v3 Cicer arietinum L.
Ca_00569_v3 Cicer arietinum L.
Ca_18105_v3 Cicer arietinum L.
CBR_g19626 Chara braunii
CBR_g44333 Chara braunii
Cc06_g23200 Coffea canephora
Cc10_g08810 Coffea canephora
CDE02G2121 Ceratophyllum demersum
CDE05G2688 Ceratophyllum demersum
CDE11G0084 Ceratophyllum demersum
Cfa008013 Carpinus fangiana
Cfa020107 Carpinus fangiana
Cfa022688 Carpinus fangiana
Ciclev10012772m.g Citrus clementina
Ciclev10012779m.g Citrus clementina
Ciclev10013690m.g Citrus clementina
CiPaw.04G006600 Carya illinoinensis
CiPaw.09G025500 Carya illinoinensis
CiPaw.10G022500 Carya illinoinensis
ClCG09G014830 Citrullus lanatus
ClCG09G014840 Citrullus lanatus
ClCG11G001050 Citrullus lanatus
COL.COLO4_29445 Corchorus olitorius
Cpa.g.sc103.75 Carica papaya
Cpa.g.sc85.10 Carica papaya
Cre06.g290950 Chlamydomonas reinhardtii
CsaV3_2G030730 Cucumis sativus L.
CsaV3_5G013080 Cucumis sativus L.
CsaV3_7G022360 Cucumis sativus L.
CsaV3_UNG013130 Cucumis sativus L.
CsaV3_UNG232200 Cucumis sativus L.
CSS0010896 Camellia sinensis var. sinensis
CSS0023364 Camellia sinensis var. sinensis
CSS0025554 Camellia sinensis var. sinensis
DCAR_008346 Daucus carota
DCAR_009684 Daucus carota
DCAR_013679 Daucus carota
Dinv24024 Davidia involucrata
Dinv25032 Davidia involucrata
Duzib093G1474 Durio zibethinus
Duzib106G0533 Durio zibethinus
Duzib128G1835 Durio zibethinus
Duzib177G0265 Durio zibethinus
ECA233G0432 Erigeron canadensis
ECA248G2700 Erigeron canadensis
EL10Ac3g05143 Beta vulgaris
Eucgr.A02519 Eucalyptus grandis
FAN02G1119 Fragaria x ananassa
FAN05G5045 Fragaria x ananassa
FAN05G5183 Fragaria x ananassa
FAN09G2695 Fragaria x ananassa
FAN14G4283 Fragaria x ananassa
FAN15G2024 Fragaria x ananassa
FAN20G2869 Fragaria x ananassa
FAN24G3036 Fragaria x ananassa
FAN27G1831 Fragaria x ananassa
FvH4_2g26500 Fragaria vesca
FvH4_3g33535 Fragaria vesca
FvH4_4g10002 Fragaria vesca
FvH4_5g31441 Fragaria vesca
FvH4_6g14761 Fragaria vesca
FvH4_6g21310 Fragaria vesca
Glyma.02G167900 Glycine max
Glyma.09G103400 Glycine max
Glyma.12G201900 Glycine max
Glyma.13G300300 Glycine max
Gohir.A01G136200 Gossypium hirsutum
Gohir.A01G198900 Gossypium hirsutum
Gohir.A03G020901 Gossypium hirsutum
Gohir.A03G172200 Gossypium hirsutum
Gohir.A04G056500 Gossypium hirsutum
Gohir.A05G219200 Gossypium hirsutum
Gohir.A07G185100 Gossypium hirsutum
Gohir.A07G228700 Gossypium hirsutum
Gohir.A09G131200 Gossypium hirsutum
Gohir.A10G196800 Gossypium hirsutum
Gohir.A11G133600 Gossypium hirsutum
Gohir.A12G232200 Gossypium hirsutum
Gohir.A13G083600 Gossypium hirsutum
Gohir.D01G110200 Gossypium hirsutum
Gohir.D01G110300 Gossypium hirsutum
Gohir.D01G123300 Gossypium hirsutum
Gohir.D01G189050 Gossypium hirsutum
Gohir.D04G093800 Gossypium hirsutum
Gohir.D05G103200 Gossypium hirsutum
Gohir.D06G047450 Gossypium hirsutum
Gohir.D07G230600 Gossypium hirsutum
Gohir.D08G256501 Gossypium hirsutum
Gohir.D08G263500 Gossypium hirsutum
Gohir.D09G127200 Gossypium hirsutum
Gohir.D09G127233 Gossypium hirsutum
Gohir.D09G127266 Gossypium hirsutum
Gohir.D09G127300 Gossypium hirsutum
Gohir.D09G127400 Gossypium hirsutum
Gohir.D09G127500 Gossypium hirsutum
Gohir.D09G220300 Gossypium hirsutum
Gohir.D10G127200 Gossypium hirsutum
Gohir.D13G098100 Gossypium hirsutum
Gorai.002G154300 Gossypium raimondii
Gorai.002G189300 Gossypium raimondii
Gorai.002G232600 Gossypium raimondii
Gorai.003G077100 Gossypium raimondii
Gorai.005G034200 Gossypium raimondii
Gorai.006G146000 Gossypium raimondii
Gorai.009G396400 Gossypium raimondii
Gorai.011G118300 Gossypium raimondii
Gorai.013G079500 Gossypium raimondii
GSVIVG01026328001 Vitis vinifera
GSVIVG01033419001 Vitis vinifera
HanXRQChr02g0054411 Helianthus annuus
HanXRQChr02g0054481 Helianthus annuus
HanXRQChr03g0090501 Helianthus annuus
HanXRQChr11g0328401 Helianthus annuus
HanXRQChr13g0397821 Helianthus annuus
Haze_14046 Corylus avellana
Haze_14057 Corylus avellana
Haze_26459 Corylus avellana
Hma1.2p1_0075F.1_g039410 Hydrangea macrophylla
Hma1.2p1_0647F.1_g195060 Hydrangea macrophylla
HPP92_001050 Vanilla planifolia
HPP92_021500 Vanilla planifolia
HPP92_021519 Vanilla planifolia
Hund09733 Selenicereus undatus
Hund09735 Selenicereus undatus
Hund09738 Selenicereus undatus
Hund09740 Selenicereus undatus
Hund18398 Selenicereus undatus
Lalb_Chr15g0085431 Lupinus albus
Lalb_Chr18g0053911 Lupinus albus
Lalb_Chr21g0316301 Lupinus albus
Lj1C1135G12 Lonicera japonica
Lj1g0014118 Lotus japonicus
Lj2C359T12 Lonicera japonica
Lj5g0007588 Lotus japonicus
Lj9A699T53 Lonicera japonica
Lsat_1_v5_gn_1_59881 Lactuca sativa
Lsat_1_v5_gn_2_58480 Lactuca sativa
Lsat_1_v5_gn_3_60541 Lactuca sativa
Lsat_1_v5_gn_4_6460 Lactuca sativa
Lsat_1_v5_gn_5_900 Lactuca sativa
Lsat_1_v5_gn_6_37581 Lactuca sativa
Manes.08G039000 Manihot esculenta
Manes.09G041000 Manihot esculenta
Mapoly0037s0139 Marchantia polymorpha
MBI01_g29964_MAGBIO Magnolia biondii
MBI01_g43717_MAGBIO Magnolia biondii
MBI02_g17771_MAGBIO Magnolia biondii
MBI04_g09716_MAGBIO Magnolia biondii
MBI04_g14918_MAGBIO Magnolia biondii
MBI07_g11189_MAGBIO Magnolia biondii
MBI07_g28521_MAGBIO Magnolia biondii
MBI11_g32528_MAGBIO Magnolia biondii
MBI13_g36810_MAGBIO Magnolia biondii
MCO07G162 Micromonas commoda
MD04G1033100 Malus domestica
MD12G1044700 Malus domestica
MD12G1049500 Malus domestica
MD12G1049600 Malus domestica
MD14G1043500 Malus domestica
MD14G1048400 Malus domestica
MD14G1048600 Malus domestica
Medtr0306s0010 Medicago truncatula
Medtr0515s0010 Medicago truncatula
Medtr1g054310 Medicago truncatula
Medtr7g107380 Medicago truncatula
MELO3C012670.2 Cucumis melo
MELO3C020049.2 Cucumis melo
MELO3C025582.2 Cucumis melo
Migut.C01367 Erythranthe guttata
Migut.K00011 Erythranthe guttata
MSTRG.10856 Avicennia marina
MSTRG.1589 Avicennia marina
MSTRG.26070 Avicennia marina
Nitab4.5_0000358g0160 Nicotiana tabacum
Nitab4.5_0000358g0170 Nicotiana tabacum
Nitab4.5_0002611g0060 Nicotiana tabacum
Nitab4.5_0002769g0020 Nicotiana tabacum
Nitab4.5_0002769g0050 Nicotiana tabacum
Nitab4.5_0004584g0020 Nicotiana tabacum
Nitab4.5_0005550g0060 Nicotiana tabacum
Nitab4.5_0006500g0020 Nicotiana tabacum
Nitab4.5_0014603g0010 Nicotiana tabacum
Nn1g02627 Nelumbo nucifera
Nn1g07678 Nelumbo nucifera
Nn1g09063 Nelumbo nucifera
Nn2g15838 Nelumbo nucifera
Nn5g29291 Nelumbo nucifera
Nn5g31072 Nelumbo nucifera
Nn7g35883 Nelumbo nucifera
Oeu013904.1 Olea europaea
Oeu028103.1 Olea europaea
Oeu051771.1 Olea europaea
Os01g0100700 Oryza sativa ssp. japonica
Os11g0482000 Oryza sativa ssp. japonica
Peaxi162Scf00003g04712 Petunia axillaris
Peaxi162Scf00078g00422 Petunia axillaris
Peaxi162Scf00463g00128 Petunia axillaris
Peaxi162Scf01397g00001 Petunia axillaris
PGR004G2605 Punica granatum
PGR142G3468 Punica granatum
PGSC0003DMG400008351 Solanum tuberosum
PGSC0003DMG400017812 Solanum tuberosum
Phvul.005G107000 Phaseolus vulgaris
Phvul.007G264200 Phaseolus vulgaris
Potri.006G197700 Populus trichocarpa
Potri.016G063200 Populus trichocarpa
Pp3c20_18970 Physcomitrium patens
Pp3c23_6150 Physcomitrium patens
Pp3c24_18880 Physcomitrium patens
Pp3c8_16820 Physcomitrium patens
Pp3c8_16860 Physcomitrium patens
PRCOL_00000810 Prasinoderma coloniale
Prupe.1G502000 Prunus persica
Prupe.7G086600 Prunus persica
Prupe.7G086700 Prunus persica
Psat0s2632g0040 Pisum sativum
Psat5g174960 Pisum sativum
Psat6g110320 Pisum sativum
PSO017G0564 Papaver somniferum
PSO017G3327 Papaver somniferum
PSO063G3798 Papaver somniferum
PSO063G4353 Papaver somniferum
PSO339G1484 Papaver somniferum
PSO384G2614 Papaver somniferum
QL02p055374 Quercus lobata
QL02p056435 Quercus lobata
QL07p025820 Quercus lobata
RcHm_v2.0_Chr3g0477901 Rosa chinensis
RcHm_v2.0_Chr6g0295301 Rosa chinensis
Rhsim03G0001900 Rhododendron simsii
Rhsim04G0091800 Rhododendron simsii
Sabra06G0152200 Salix brachista
Sabra16G0065600 Salix brachista
SalBow1G0085 Salvia bowleyana
SalBow6G0950 Salvia bowleyana
Sc13g0002570 Simmondsia chinensis
Sc25g0005020 Simmondsia chinensis
Sed0012727 Sechium edule
Sed0025547 Sechium edule
Sed0026810 Sechium edule
Sed0027659 Sechium edule
SEGI_04708 Sequoiadendron giganteum
SEGI_31524 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32596 Striga asiatica
SGA_v2.0_scaffold24G10636 Striga asiatica
SGA_v2.0_scaffold274G46509 Striga asiatica
SGA_v2.0_scaffold94G28406 Striga asiatica
SMO196G0239 Selaginella moellendorffii
SMO347G0442 Selaginella moellendorffii
SMO364G0564 Selaginella moellendorffii
Solyc03g045110.3 Solanum lycopersicum
Solyc10g078620.1 Solanum lycopersicum
Solyc11g042610.2 Solanum lycopersicum
Sopen10g029250 Solanum pennellii
Sopen11g018760 Solanum pennellii
Sp3g10150 Schrenkiella parvula
Sp4g19590 Schrenkiella parvula
TAR369G0660 Trochodendron aralioides
TAR623G0533 Trochodendron aralioides
TAR636G2652 Trochodendron aralioides
THA.LOC104799272 Tarenaya hassleriana
THA.LOC104809939 Tarenaya hassleriana
THA.LOC104826782 Tarenaya hassleriana
Thecc.05G181200 Theobroma cacao
Thhalv10017239m.g Eutrema salsugineum
Thhalv10021528m.g Eutrema salsugineum
TPR.G31109 Trifolium pratense
TPR.G32296 Trifolium pratense
TPR.G7387 Trifolium pratense
TPR.G908 Trifolium pratense
TWI12G0319 Tripterygium wilfordii
TWI53G2126 Tripterygium wilfordii
TWI56G0610 Tripterygium wilfordii
unitig_736.g22310 Utricularia gibba
unitig_749.g14026 Utricularia gibba
vmacro09130 Vaccinium macrocarpon
vmacro12560 Vaccinium macrocarpon
VMungo0720G2833 Vigna mungo
Zm00001eb285610 Zea mays
Zm00001eb334050 Zea mays

User provided reference genes

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