Gene: Sopen11g018760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g018760
  • Transcript Identifier Sopen11g018760.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 42447859-42449914 : positive

Gene Family Information

  • ID HOM05D000861
  • #Genes/#Species 694/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g018760.1

Descriptions

  • Description 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo), One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A. | ribosomal protein 5B (RPS5B) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: in 7 components | EXPRESSED IN: fruit, cultured cell, pollen tube, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site , Ribosomal protein S7, eukaryotic/archaeal , Ribosomal protein S7 | BEST Arabidopsis thaliana protein match is: ribosomal protein 5A
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G37270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G37270
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G37270
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G37270
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT2G37270
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G37270
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G37270
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G37270
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G11940
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G37270
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G37270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000235 Ribosomal protein S5/S7
IPR005716 Ribosomal protein S5/S7, eukaryotic/archaeal
IPR036823 Ribosomal protein S7 domain superfamily
IPR023798 Ribosomal protein S7 domain
Mapman id Description
17.1.3.1.6 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS5