Gene: TAR369G0660
General Information
Structural Information
- Species Trochodendron aralioides
- Gene Identifier TAR369G0660
- Transcript Identifier TAR369G0660.1
- Gene Type Coding gene
- Location group18 : 55269181-55289585 : negative
Gene Family Information
- ID HOM05D000861
- #Genes/#Species 694/100
- Phylogenetic origin
- ID ORTHO05D001799
- #Genes/#Species 354/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id evm.TU.group18.1786
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G37270 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015935 | IEA | InterPro | small ribosomal subunit | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G37270 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G37270 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT2G37270 |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT2G37270 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT2G37270 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G37270 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G37270 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G11940 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G37270 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT2G37270 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002156 | Ribonuclease H domain |
| IPR005716 | Ribosomal protein S5/S7, eukaryotic/archaeal |
| IPR036823 | Ribosomal protein S7 domain superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR000235 | Ribosomal protein S5/S7 |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR023798 | Ribosomal protein S7 domain |
| Mapman id | Description |
|---|---|
| 17.1.3.1.6 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS5 |