Gene: Solyc11g042610.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g042610.2
  • Transcript Identifier Solyc11g042610.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 34406835-34408890 : negative

Gene Family Information

  • ID HOM05D000861
  • #Genes/#Species 694/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g042610.2.1
  • uniprot A0A3Q7IVL4
  • gene_id Solyc11g042610

Descriptions

  • Description 40S ribosomal protein S5 (AHRD V3.3 *** A0A1U8EKR1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IBA
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation
GO:0000028
IBA
GOA Databaseribosomal small subunit assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019843
IBA
GOA DatabaserRNA binding
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G37270
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G37270
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G11940
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G37270
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G37270
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G37270
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G37270
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G37270
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G37270
GO:0005840
IBA
IEA
GOA Databaseribosome
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005716 Ribosomal protein S5/S7, eukaryotic/archaeal
IPR000235 Ribosomal protein S5/S7
IPR036823 Ribosomal protein S7 domain superfamily
IPR023798 Ribosomal protein S7 domain
Mapman id Description
17.1.3.1.6 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS5