Gene: PGR004G2605
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR004G2605
- Transcript Identifier PGR004G2605.01
- Gene Type Coding gene
- Location NC_045131.1 : 2318194-2319486 : positive
Gene Family Information
- ID HOM05D000861
- #Genes/#Species 694/100
- Phylogenetic origin
- ID ORTHO05D001799
- #Genes/#Species 354/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031397284.1
- name LOC116208158
- name XM_031541424.1
- id gene-LOC116208158
- uniprot A0A6P8DSE3
Descriptions
- product 40S ribosomal protein S5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G37270 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G37270 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT2G37270 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G37270 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G11940 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G37270 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G37270 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT2G37270 |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT2G37270 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT2G37270 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G37270 |
| GO:0015935 | IEA | GOA Database | small ribosomal subunit | |
| GO:0015935 | IEA | InterPro | small ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.6 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS5 |