Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06060 Brassica napus
A07p26100 Brassica napus
A09p46530 Brassica napus
A09p54680 Brassica napus
Aa31LG10G16550 Aethionema arabicum
Aa31LG1G28990 Aethionema arabicum
Aa31LG5G22750 Aethionema arabicum
Aa31LG9G4500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1894 Anthoceros agrestis
Actinidia11246 Actinidia chinensis
Actinidia19750 Actinidia chinensis
Actinidia21048 Actinidia chinensis
Actinidia24824 Actinidia chinensis
Ah.08g212280 Amaranthus hybridus
Ah.08g213450 Amaranthus hybridus
Ah.15g093190 Amaranthus hybridus
AL4G47230 Arabidopsis lyrata
AL5G34440 Arabidopsis lyrata
AL5G45610 Arabidopsis lyrata
Aqoxy2G02943_Aqoxy2G02942 Aquilegia oxysepala
Aqoxy4G03064_Aqoxy4G03065 Aquilegia oxysepala
Aqoxy5G00756 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.34YUZ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6MQ181 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.856I4D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CEC6TI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8UX5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NH9MY4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NL0HTV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RL25CR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TXZ48C Arachis hypogaea
AT2G47650 Arabidopsis thaliana
AT3G53520 Arabidopsis thaliana
AT3G62830 Arabidopsis thaliana
ATR0706G237 Amborella trichopoda
ATR0759G028 Amborella trichopoda
ATR0759G127 Amborella trichopoda
Atru.chr4.2876 Acer truncatum
Atru.chr5.1148 Acer truncatum
Atru.chr8.2489 Acer truncatum
AUR62008623 Chenopodium quinoa
AUR62033148 Chenopodium quinoa
AUR62040989 Chenopodium quinoa
AUR62042970 Chenopodium quinoa
BcaB01g00267 Brassica carinata
BcaB01g03163 Brassica carinata
BcaB02g07317 Brassica carinata
BcaB02g08096 Brassica carinata
BcaB02g08523 Brassica carinata
BcaB02g08524 Brassica carinata
BcaB06g29490 Brassica carinata
BcaC02g09155 Brassica carinata
BcaC02g09156 Brassica carinata
BcaC02g10315 Brassica carinata
BcaC07g39713 Brassica carinata
BcaC07g39714 Brassica carinata
BcaC07g40755 Brassica carinata
BcaC07g40758 Brassica carinata
BcaC07g42736 Brassica carinata
BcaC08g45240 Brassica carinata
BolC4t24575H Brassica oleracea
BolC4t25475H Brassica oleracea
BolC4t28773H Brassica oleracea
BolC6t38011H Brassica oleracea
BolC8t50488H Brassica oleracea
BolC8t51338H Brassica oleracea
BraA04t16310Z Brassica rapa
BraA09t40117Z Brassica rapa
BraA09t40118Z Brassica rapa
BraA09t40879Z Brassica rapa
C04p30410 Brassica napus
C04p39030 Brassica napus
C06p28420 Brassica napus
C08p28860 Brassica napus
C08p37580 Brassica napus
CAN.G382.5 Capsicum annuum
CAN.G418.10 Capsicum annuum
CAN.G472.3 Capsicum annuum
CAN.G484.43 Capsicum annuum
CAN.G687.7 Capsicum annuum
CAN.G687.8 Capsicum annuum
CANSAT25G1519 Cannabis sativa
CANSAT78G2157 Cannabis sativa
CANSAT80G1488 Cannabis sativa
CARHR121880 Cardamine hirsuta
CARHR143050 Cardamine hirsuta
CARHR163420 Cardamine hirsuta
CARHR163430 Cardamine hirsuta
CARHR173100 Cardamine hirsuta
Carub.0004s3038 Capsella rubella
Carub.0005s2010 Capsella rubella
Carub.0005s2949 Capsella rubella
Ca_09594_v3 Cicer arietinum L.
Ca_10336_v3 Cicer arietinum L.
Ca_21487_v3 Cicer arietinum L.
CBR_g11144 Chara braunii
CBR_g11148 Chara braunii
Cc01_g20830 Coffea canephora
Cc03_g01720 Coffea canephora
Cc03_g01730 Coffea canephora
Cc06_g03150 Coffea canephora
CDE01G0520 Ceratophyllum demersum
CDE09G0520 Ceratophyllum demersum
CDE12G0052 Ceratophyllum demersum
Cfa005913 Carpinus fangiana
Cfa015399 Carpinus fangiana
Cfa017450 Carpinus fangiana
Ciclev10004959m.g Citrus clementina
Ciclev10011665m.g Citrus clementina
Ciclev10020167m.g Citrus clementina
CiPaw.01G147200 Carya illinoinensis
CiPaw.02G081800 Carya illinoinensis
CiPaw.07G109000 Carya illinoinensis
CiPaw.08G095400 Carya illinoinensis
CiPaw.09G187100 Carya illinoinensis
CiPaw.10G141300 Carya illinoinensis
ClCG06G005060 Citrullus lanatus
ClCG10G010930 Citrullus lanatus
ClCG10G020840 Citrullus lanatus
COL.COLO4_06937 Corchorus olitorius
COL.COLO4_09160 Corchorus olitorius
COL.COLO4_13844 Corchorus olitorius
COL.COLO4_23346 Corchorus olitorius
Cpa.g.sc114.6 Carica papaya
Cpa.g.sc9.262 Carica papaya
Cre03.g169400 Chlamydomonas reinhardtii
CsaV3_3G035180 Cucumis sativus L.
CsaV3_4G000820 Cucumis sativus L.
CsaV3_6G023940 Cucumis sativus L.
CsaV3_6G023950 Cucumis sativus L.
CSS0005324 Camellia sinensis var. sinensis
CSS0008132 Camellia sinensis var. sinensis
CSS0013645 Camellia sinensis var. sinensis
CSS0022545 Camellia sinensis var. sinensis
CSS0030745 Camellia sinensis var. sinensis
CSS0042718 Camellia sinensis var. sinensis
CSS0043285 Camellia sinensis var. sinensis
DCAR_002470 Daucus carota
DCAR_002833 Daucus carota
DCAR_014941 Daucus carota
DCAR_027066 Daucus carota
Dinv19693 Davidia involucrata
Dinv29762 Davidia involucrata
Dinv35661 Davidia involucrata
Dinv37221 Davidia involucrata
Duzib052G0721 Durio zibethinus
Duzib093G0442 Durio zibethinus
Duzib128G1244 Durio zibethinus
Duzib133G1284 Durio zibethinus
Duzib138G1329 Durio zibethinus
Duzib151G0838 Durio zibethinus
Duzib211G0194 Durio zibethinus
ECA233G4774 Erigeron canadensis
ECA236G1185 Erigeron canadensis
ECA238G2188 Erigeron canadensis
ECA246G0774 Erigeron canadensis
ECA248G3345 Erigeron canadensis
EL10Ac7g17304 Beta vulgaris
EL10Ac7g17469 Beta vulgaris
Eucgr.A01221 Eucalyptus grandis
Eucgr.H01112 Eucalyptus grandis
Eucgr.H03936 Eucalyptus grandis
FAN02G3992 Fragaria x ananassa
FAN05G4578 Fragaria x ananassa
FAN07G1105 Fragaria x ananassa
FAN09G3537 Fragaria x ananassa
FAN12G2181 Fragaria x ananassa
FAN12G3946 Fragaria x ananassa
FAN14G0467 Fragaria x ananassa
FAN15G1683 Fragaria x ananassa
FAN17G2135 Fragaria x ananassa
FAN18G0431 Fragaria x ananassa
FAN20G1356 Fragaria x ananassa
FAN24G3298 Fragaria x ananassa
FAN27G2009 Fragaria x ananassa
FvH4_2g25720 Fragaria vesca
FvH4_4g18410 Fragaria vesca
FvH4_6g14640 Fragaria vesca
Glyma.02G018000 Glycine max
Glyma.03G214700 Glycine max
Glyma.07G246600 Glycine max
Glyma.10G018400 Glycine max
Glyma.10G045800 Glycine max
Glyma.13G133800 Glycine max
Glyma.17G027300 Glycine max
Glyma.19G211300 Glycine max
Gohir.A01G219100 Gossypium hirsutum
Gohir.A02G050000 Gossypium hirsutum
Gohir.A04G078700 Gossypium hirsutum
Gohir.A08G076100 Gossypium hirsutum
Gohir.A11G114600 Gossypium hirsutum
Gohir.A12G130400 Gossypium hirsutum
Gohir.D01G208200 Gossypium hirsutum
Gohir.D02G055100 Gossypium hirsutum
Gohir.D04G117900 Gossypium hirsutum
Gohir.D08G085500 Gossypium hirsutum
Gohir.D11G119700 Gossypium hirsutum
Gohir.D12G134200 Gossypium hirsutum
Gorai.002G253300 Gossypium raimondii
Gorai.004G090000 Gossypium raimondii
Gorai.005G061000 Gossypium raimondii
Gorai.007G128200 Gossypium raimondii
Gorai.008G145200 Gossypium raimondii
Gorai.009G422900 Gossypium raimondii
GSVIVG01025596001 Vitis vinifera
GSVIVG01025597001 Vitis vinifera
GSVIVG01028014001 Vitis vinifera
GSVIVG01035142001 Vitis vinifera
HanXRQChr06g0163791 Helianthus annuus
HanXRQChr09g0276911 Helianthus annuus
HanXRQChr11g0349471 Helianthus annuus
HanXRQChr12g0382701 Helianthus annuus
HanXRQChr14g0453831 Helianthus annuus
HanXRQChr14g0453851 Helianthus annuus
HanXRQChr17g0538771 Helianthus annuus
Haze_01184 Corylus avellana
Haze_04937 Corylus avellana
Haze_20715 Corylus avellana
Hma1.2p1_0350F.1_g132590 Hydrangea macrophylla
Hma1.2p1_0491F.1_g164550 Hydrangea macrophylla
Hma1.2p1_0494F.1_g165170 Hydrangea macrophylla
HPP92_001314 Vanilla planifolia
HPP92_001315 Vanilla planifolia
HPP92_001351 Vanilla planifolia
HPP92_001352 Vanilla planifolia
HPP92_001366 Vanilla planifolia
HPP92_001367 Vanilla planifolia
HPP92_001448 Vanilla planifolia
HPP92_002148 Vanilla planifolia
HPP92_002149 Vanilla planifolia
HPP92_019810 Vanilla planifolia
Hund05427 Selenicereus undatus
Lalb_Chr01g0019141 Lupinus albus
Lalb_Chr01g0019151 Lupinus albus
Lalb_Chr02g0143271 Lupinus albus
Lalb_Chr02g0143281 Lupinus albus
Lalb_Chr02g0153291 Lupinus albus
Lalb_Chr02g0153301 Lupinus albus
Lalb_Chr06g0163531 Lupinus albus
Lalb_Chr06g0171111 Lupinus albus
Lalb_Chr07g0177801 Lupinus albus
Lalb_Chr15g0083441 Lupinus albus
Lalb_Chr18g0046981 Lupinus albus
Lalb_Chr18g0046991 Lupinus albus
Lalb_Chr18g0051581 Lupinus albus
Lalb_Chr20g0113091 Lupinus albus
Lalb_Chr20g0113101 Lupinus albus
Lj1A24T67 Lonicera japonica
Lj2A102T69 Lonicera japonica
Lj2A1194G51 Lonicera japonica
Lj3A822T34 Lonicera japonica
Lj3C973T15 Lonicera japonica
Lj4g0011937 Lotus japonicus
Lj5g0008814 Lotus japonicus
Lj5g0010631 Lotus japonicus
Lsat_1_v5_gn_1_55141 Lactuca sativa
Lsat_1_v5_gn_2_111261 Lactuca sativa
Lsat_1_v5_gn_3_24780 Lactuca sativa
Lsat_1_v5_gn_6_95441 Lactuca sativa
Lsat_1_v5_gn_8_163520 Lactuca sativa
Lsat_1_v5_gn_8_163700 Lactuca sativa
Lsat_1_v5_gn_9_5660 Lactuca sativa
Manes.01G219000 Manihot esculenta
Manes.05G062100 Manihot esculenta
Manes.08G074700 Manihot esculenta
Mapoly0073s0028 Marchantia polymorpha
MBI04_g22383_MAGBIO Magnolia biondii
MBI14_g26672_MAGBIO Magnolia biondii
MBI18_g06023_MAGBIO Magnolia biondii
MBI19_g25273_MAGBIO Magnolia biondii
MCO10G218 Micromonas commoda
MD00G1128000 Malus domestica
MD03G1288200 Malus domestica
MD04G1118200 Malus domestica
MD11G1309900 Malus domestica
MD12G1133600 Malus domestica
MD16G1167000 Malus domestica
Medtr1g067530 Medicago truncatula
Medtr1g088480 Medicago truncatula
Medtr4g120030 Medicago truncatula
MELO3C009287.2 Cucumis melo
MELO3C017955.2 Cucumis melo
MELO3C021322.2 Cucumis melo
Migut.D00219 Erythranthe guttata
Migut.G00143 Erythranthe guttata
Migut.J00383 Erythranthe guttata
Migut.L01631 Erythranthe guttata
MSTRG.10104 Avicennia marina
MSTRG.17407 Avicennia marina
MSTRG.21634 Avicennia marina
MSTRG.26747 Avicennia marina
MSTRG.26748 Avicennia marina
Nitab4.5_0000570g0240 Nicotiana tabacum
Nitab4.5_0000643g0050 Nicotiana tabacum
Nitab4.5_0000725g0140 Nicotiana tabacum
Nitab4.5_0001879g0080 Nicotiana tabacum
Nitab4.5_0002761g0040 Nicotiana tabacum
Nitab4.5_0002818g0040 Nicotiana tabacum
Nitab4.5_0002820g0090 Nicotiana tabacum
Nitab4.5_0003466g0030 Nicotiana tabacum
Nitab4.5_0004367g0020 Nicotiana tabacum
Nitab4.5_0004617g0020 Nicotiana tabacum
Nitab4.5_0005362g0060 Nicotiana tabacum
Nitab4.5_0008047g0030 Nicotiana tabacum
Nn2g10521 Nelumbo nucifera
Nn2g12855 Nelumbo nucifera
Nn3g21490 Nelumbo nucifera
Oeu010668.1 Olea europaea
Oeu010669.1 Olea europaea
Oeu023871.2 Olea europaea
Oeu046679.1 Olea europaea
Oeu048337.1 Olea europaea
Oeu049190.1 Olea europaea
Oeu060061.1 Olea europaea
Os01g0315800 Oryza sativa ssp. japonica
Os01g0837300 Oryza sativa ssp. japonica
Os03g0280800 Oryza sativa ssp. japonica
Os05g0363200 Oryza sativa ssp. japonica
Peaxi162Scf00001g04320 Petunia axillaris
Peaxi162Scf00017g01723 Petunia axillaris
Peaxi162Scf00039g00617 Petunia axillaris
Peaxi162Scf00246g01120 Petunia axillaris
Peaxi162Scf00646g00318 Petunia axillaris
PGR004G2387 Punica granatum
PGR031G2934 Punica granatum
PGR119G2161 Punica granatum
PGSC0003DMG400004632 Solanum tuberosum
PGSC0003DMG400017601 Solanum tuberosum
PGSC0003DMG401011335 Solanum tuberosum
PGSC0003DMG401011377 Solanum tuberosum
PGSC0003DMG402011335 Solanum tuberosum
PGSC0003DMG402011377 Solanum tuberosum
PGSC0003DMG402023929 Solanum tuberosum
Phvul.001G207400 Phaseolus vulgaris
Phvul.003G096800 Phaseolus vulgaris
Phvul.007G146300 Phaseolus vulgaris
Phvul.L001841 Phaseolus vulgaris
Potri.002G204400 Populus trichocarpa
Potri.006G214000 Populus trichocarpa
Potri.014G129200 Populus trichocarpa
Potri.016G080500 Populus trichocarpa
Pp3c10_11730 Physcomitrium patens
Pp3c10_11740 Physcomitrium patens
Pp3c14_15630 Physcomitrium patens
Pp3c4_23720 Physcomitrium patens
PRCOL_00003082 Prasinoderma coloniale
Prupe.1G134000 Prunus persica
Prupe.6G247300 Prunus persica
Prupe.8G261400 Prunus persica
Psat4g026720 Pisum sativum
Psat6g066200 Pisum sativum
Psat6g066240 Pisum sativum
Psat6g165480 Pisum sativum
PSO170G2637 Papaver somniferum
PSO210G4989 Papaver somniferum
PSO339G2297 Papaver somniferum
PSO384G1122 Papaver somniferum
PSO407G0314 Papaver somniferum
PSO832G1221 Papaver somniferum
QL06p009642 Quercus lobata
QL07p046562 Quercus lobata
QL12p028482 Quercus lobata
RcHm_v2.0_Chr3g0467761 Rosa chinensis
RcHm_v2.0_Chr4g0422861 Rosa chinensis
RcHm_v2.0_Chr6g0294001 Rosa chinensis
RcHm_v2.0_Chr6g0294011 Rosa chinensis
Rhsim01G0285000 Rhododendron simsii
Rhsim04G0224300 Rhododendron simsii
Rhsim05G0186400 Rhododendron simsii
Rhsim13G0010200 Rhododendron simsii
Sabra02G0154800 Salix brachista
Sabra06G0164900 Salix brachista
Sabra14G0096000 Salix brachista
Sabra16G0088700 Salix brachista
SalBow2G0818 Salvia bowleyana
SalBow3G3551 Salvia bowleyana
SalBow4G3028 Salvia bowleyana
Sc01g0003850 Simmondsia chinensis
Sc05g0003860 Simmondsia chinensis
Sed0000352 Sechium edule
Sed0002085 Sechium edule
Sed0004626 Sechium edule
Sed0011682 Sechium edule
Sed0012443 Sechium edule
Sed0015160 Sechium edule
SEGI_16484 Sequoiadendron giganteum
SEGI_26335 Sequoiadendron giganteum
SEGI_34730 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33852 Striga asiatica
SGA_v2.0_scaffold1G00365 Striga asiatica
SGA_v2.0_scaffold1G00366 Striga asiatica
SGA_v2.0_scaffold2G01392 Striga asiatica
SGA_v2.0_scaffold35G14201 Striga asiatica
SGA_v2.0_scaffold67G22618 Striga asiatica
SGA_v2.0_scaffold94G28633 Striga asiatica
SGA_v2.0_scaffold982G53766 Striga asiatica
SMO119G0046 Selaginella moellendorffii
SMO147G0420 Selaginella moellendorffii
Solyc01g066700.4 Solanum lycopersicum
Solyc01g066710.4 Solanum lycopersicum
Solyc09g005530.3 Solanum lycopersicum
Solyc09g005810.4 Solanum lycopersicum
Solyc09g075120.3 Solanum lycopersicum
Solyc10g085920.3 Solanum lycopersicum
Solyc12g099480.2 Solanum lycopersicum
Sopen01g028320 Solanum pennellii
Sopen09g001400 Solanum pennellii
Sopen09g001440 Solanum pennellii
Sopen09g001700 Solanum pennellii
Sopen09g029930 Solanum pennellii
Sopen09g029940 Solanum pennellii
Sopen10g035300 Solanum pennellii
Sopen12g034150 Solanum pennellii
Sp4g29590 Schrenkiella parvula
Sp5g00680 Schrenkiella parvula
Sp5g08810 Schrenkiella parvula
TAR362G0611 Trochodendron aralioides
TAR365G0347 Trochodendron aralioides
TAR369G0164 Trochodendron aralioides
TAR633G0896 Trochodendron aralioides
TAR633G1203 Trochodendron aralioides
TAR633G2311 Trochodendron aralioides
TAR636G2239 Trochodendron aralioides
THA.LOC104798839 Tarenaya hassleriana
THA.LOC104800000 Tarenaya hassleriana
THA.LOC104802173 Tarenaya hassleriana
THA.LOC104805404 Tarenaya hassleriana
THA.LOC104807015 Tarenaya hassleriana
THA.LOC104827551 Tarenaya hassleriana
Thecc.01G300400 Theobroma cacao
Thecc.04G286700 Theobroma cacao
Thecc.05G047100 Theobroma cacao
Thhalv10001451m.g Eutrema salsugineum
Thhalv10005973m.g Eutrema salsugineum
Thhalv10010296m.g Eutrema salsugineum
TPR.G29930 Trifolium pratense
TPR.G3179 Trifolium pratense
TPR.G33999 Trifolium pratense
TWI09G1645 Tripterygium wilfordii
TWI23G1039 Tripterygium wilfordii
TWI53G1895 Tripterygium wilfordii
TWI59G0271 Tripterygium wilfordii
TWI74G1111 Tripterygium wilfordii
TWI77G0464 Tripterygium wilfordii
TWI77G0800 Tripterygium wilfordii
unitig_26.g10171 Utricularia gibba
unitig_578.g16047 Utricularia gibba
unitig_578.g16048 Utricularia gibba
unitig_8.g3707 Utricularia gibba
unitig_8.g3708 Utricularia gibba
vmacro02451 Vaccinium macrocarpon
vmacro08168 Vaccinium macrocarpon
vmacro15011 Vaccinium macrocarpon
vmacro20106 Vaccinium macrocarpon
VMungo0720G0214 Vigna mungo
VMungo0720G2398 Vigna mungo
VMungo0720G2809 Vigna mungo
VMungo1215G0553 Vigna mungo
VMungo1383G3711 Vigna mungo
Zm00001eb038440 Zea mays
Zm00001eb130620 Zea mays
Zm00001eb148640 Zea mays
Zm00001eb285660 Zea mays
Zm00001eb315590 Zea mays
Zm00001eb346580 Zea mays
Zm00001eb368100 Zea mays
Zm00001eb397360 Zea mays

User provided reference genes

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