Gene: Sopen01g028320

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g028320
  • Transcript Identifier Sopen01g028320.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 84589029-84592525 : negative

Gene Family Information

  • ID HOM05D000739
  • #Genes/#Species 792/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g028320.1

Descriptions

  • Description encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. | UDP-xylose synthase 4 (UXS4) | CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase , NAD(P)-binding domain | BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein ., NAD(P)-binding domain, GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042732
IEA
InterProD-xylose metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048040
IEA
InterProUDP-glucuronate decarboxylase activity
GO:0070403
IEA
InterProNAD+ binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT3G62830
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT3G62830
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT3G62830
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G62830
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT3G62830
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G47650
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G47650
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G62830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036291 NAD(P)-binding domain superfamily
IPR016040 NAD(P)-binding domain
IPR044516 UDP-glucuronic acid decarboxylase
Mapman id Description
3.13.5.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase