Gene: Pp3c4_23720

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c4_23720
  • Transcript Identifier Pp3c4_23720V3.1
  • Gene Type Coding gene
  • Location Chr04 : 16011517-16014100 : negative

Gene Family Information

  • ID HOM05D000739
  • #Genes/#Species 792/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c4_23720V3.1
  • pacid 32920941
  • alias Phpat.004G090400
  • alias Phypa_182840
  • alias Pp1s60_124V6
  • uniprot A0A2K1KPP9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042732
IBA
IEA
GOA DatabaseD-xylose metabolic process
GO:0042732
IEA
InterProD-xylose metabolic process
GO:0033320
IEA
GOA DatabaseUDP-D-xylose biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048040
IBA
IEA
GOA DatabaseUDP-glucuronate decarboxylase activity
GO:0048040
IEA
InterProUDP-glucuronate decarboxylase activity
GO:0070403
IBA
IEA
GOA DatabaseNAD+ binding
GO:0070403
IEA
InterProNAD+ binding
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G62830
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G47650
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G47650
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT3G62830
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G53520
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT3G62830
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT3G62830
GO:0005737
IBA
GOA Databasecytoplasm
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR044516 UDP-glucuronic acid decarboxylase
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
3.13.5.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase