Gene: AT3G53520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53520
  • Transcript Identifier AT3G53520.1
  • Gene Type Coding gene
  • Location Chr3 : 19841635-19844057 : positive

Gene Family Information

  • ID HOM05D000739
  • #Genes/#Species 792/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53520.1
  • symbol UXS1
  • Alias ATUXS1
  • uniprot Q8VZC0

Descriptions

  • Description UDP-glucuronic acid decarboxylase 1
  • Computational description UDP-glucuronic acid decarboxylase 1 (UXS1); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2); Has 47365 Blast hits to 47309 proteins in 3022 species: Archae - 864; Bacteria - 27567; Metazoa - 790; Fungi - 366; Plants - 1585; Viruses - 98; Other Eukaryotes - 16095 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042732
IDA
IBA
IEA
Gene OntologyD-xylose metabolic process1 2
GO:0042732
IEA
InterProD-xylose metabolic process
GO:0033320
IEA
Gene OntologyUDP-D-xylose biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070403
IBA
IEA
Gene OntologyNAD+ binding2
GO:0070403
IEA
InterProNAD+ binding
GO:0048040
IDA
IBA
IEA
Gene OntologyUDP-glucuronate decarboxylase activity1 2
GO:0048040
IEA
InterProUDP-glucuronate decarboxylase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000138
HDA
Gene OntologyGolgi trans cisterna3
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
TAS
Gene Ontologymembrane1
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA, HDA
ISM
Gene OntologyGolgi apparatus4 5
GO:0032580
IEA
GOA DatabaseGolgi cisterna membrane
GO:0005737
IBA
Gene Ontologycytoplasm2
GO:0005829
HDA
Gene Ontologycytosol6
GO:0005802
HDA
Gene Ontologytrans-Golgi network7
GO:0005768
HDA
Gene Ontologyendosome7
GO:0005886
ISM
Gene Ontologyplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR044516 UDP-glucuronic acid decarboxylase
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
3.13.5.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase