Gene: AT2G47650

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G47650
  • Transcript Identifier AT2G47650.1
  • Gene Type Coding gene
  • Location Chr2 : 19538751-19541364 : negative

Gene Family Information

  • ID HOM05D000739
  • #Genes/#Species 792/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G47650.1
  • symbol UXS4
  • uniprot C0Z2I3

Descriptions

  • Description UDP-xylose synthase 4
  • Computational description UDP-xylose synthase 4 (UXS4); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: Golgi apparatus, plasma membrane, vacuole, membrane; EXPRESSED IN: cotyledon, male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2); Has 44652 Blast hits to 44610 proteins in 2978 species: Archae - 851; Bacteria - 26010; Metazoa - 746; Fungi - 333; Plants - 1297; Viruses - 49; Other Eukaryotes - 15366 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042732
IEA
GOA DatabaseD-xylose metabolic process
GO:0042732
IBA
TAS
Gene OntologyD-xylose metabolic process1 2
GO:0042732
IEA
InterProD-xylose metabolic process
GO:0033320
IEA
Gene OntologyUDP-D-xylose biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070403
IBA
IEA
Gene OntologyNAD+ binding2
GO:0070403
IEA
InterProNAD+ binding
GO:0048040
ISS, IBA
IEA
Gene OntologyUDP-glucuronate decarboxylase activity1 2
GO:0048040
IEA
InterProUDP-glucuronate decarboxylase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
TAS
Gene Ontologymembrane1
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005802
IDA
GOA Databasetrans-Golgi network
GO:0005802
HDA
Gene Ontologytrans-Golgi network3
GO:0005768
IDA
GOA Databaseendosome
GO:0005768
HDA
Gene Ontologyendosome3
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole4
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005737
IBA
Gene Ontologycytoplasm2
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0000138
HDA
Gene OntologyGolgi trans cisterna5
GO:0005794
IDA, HDA
Gene OntologyGolgi apparatus6 7
GO:0005829
RCA
Gene Ontologycytosol8
GO:0000325
HDA
Gene Ontologyplant-type vacuole9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044516 UDP-glucuronic acid decarboxylase
IPR036291 NAD(P)-binding domain superfamily
IPR016040 NAD(P)-binding domain
Mapman id Description
3.13.5.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase