Gene: COL.COLO4_09160

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_09160
  • Transcript Identifier COL.rna7957
  • Gene Type Coding gene
  • Location AWUE01014127.1 : 11045-13963 : positive

Gene Family Information

  • ID HOM05D000739
  • #Genes/#Species 792/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna7957
  • GenBank OMP04964.1
  • id gene9132
  • gene_name COLO4_09160
  • uniprot A0A1R3KD40

Descriptions

  • Description NAD-dependent epimerase/dehydratase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033320
IEA
GOA DatabaseUDP-D-xylose biosynthetic process
GO:0042732
IEA
GOA DatabaseD-xylose metabolic process
GO:0042732
IEA
InterProD-xylose metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048040
IEA
GOA DatabaseUDP-glucuronate decarboxylase activity
GO:0048040
IEA
InterProUDP-glucuronate decarboxylase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0070403
IEA
GOA DatabaseNAD+ binding
GO:0070403
IEA
InterProNAD+ binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G53520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR044516 UDP-glucuronic acid decarboxylase
IPR036291 NAD(P)-binding domain superfamily
IPR001509 NAD-dependent epimerase/dehydratase
Mapman id Description
3.13.5.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase