Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p03540 Brassica napus
Aa31LG10G4420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis
Actinidia00459 Actinidia chinensis
Ah.04g152710 Amaranthus hybridus
Ah.08g219340 Amaranthus hybridus
AL1G56960 Arabidopsis lyrata
Aqoxy6G01411 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea
AT1G49590 Arabidopsis thaliana
ATR0097G032 Amborella trichopoda
Atru.chr5.2773 Acer truncatum
AUR62022456 Chenopodium quinoa
AUR62034187 Chenopodium quinoa
AUR62042088 Chenopodium quinoa
BcaNung06359 Brassica carinata
BolC6t35591H Brassica oleracea
BraA06t23562Z Brassica rapa
C06p04620 Brassica napus
CAN.G322.16 Capsicum annuum
CANSAT25G0176 Cannabis sativa
CARHR039640 Cardamine hirsuta
Carub.0001s3879 Capsella rubella
Ca_18655_v3 Cicer arietinum L.
CBR_g17671 Chara braunii
Cc02_g18560 Coffea canephora
CDE03G0027 Ceratophyllum demersum
CDE06G1966 Ceratophyllum demersum
Ciclev10029963m.g Citrus clementina
CiPaw.05G054000 Carya illinoinensis
ClCG02G005780 Citrullus lanatus
COL.COLO4_32686 Corchorus olitorius
Cpa.g.sc62.36 Carica papaya
Cre06.g309150 Chlamydomonas reinhardtii
CsaV3_7G008730 Cucumis sativus L.
CSS0005405 Camellia sinensis var. sinensis
CSS0011003 Camellia sinensis var. sinensis
CSS0021002 Camellia sinensis var. sinensis
CSS0022737 Camellia sinensis var. sinensis
CSS0024784 Camellia sinensis var. sinensis
CSS0034996 Camellia sinensis var. sinensis
Dinv23582 Davidia involucrata
Dinv42131 Davidia involucrata
ECA234G4762 Erigeron canadensis
EL10Ac3g06870 Beta vulgaris
Eucgr.I01169 Eucalyptus grandis
FAN15G3147 Fragaria x ananassa
FAN20G1913 Fragaria x ananassa
FAN20G2937 Fragaria x ananassa
FAN24G0787 Fragaria x ananassa
FvH4_2g06680 Fragaria vesca
Glyma.01G146900 Glycine max
Glyma.02G159500 Glycine max
Glyma.10G112900 Glycine max
Gohir.A03G191700 Gossypium hirsutum
Gohir.D02G212600 Gossypium hirsutum
Gorai.005G240600 Gossypium raimondii
GSVIVG01031784001 Vitis vinifera
HanXRQChr10g0303251 Helianthus annuus
Haze_01903 Corylus avellana
HPP92_004235 Vanilla planifolia
HPP92_004257 Vanilla planifolia
Hund00325 Selenicereus undatus
Lalb_Chr09g0328181 Lupinus albus
Lj4g0006122 Lotus japonicus
Lj5C207T4 Lonicera japonica
Lsat_1_v5_gn_5_113321 Lactuca sativa
Manes.15G142500 Manihot esculenta
Mapoly0157s0003 Marchantia polymorpha
MBI02_g21199_MAGBIO Magnolia biondii
MCO05G296 Micromonas commoda
MD05G1075500 Malus domestica
MD10G1090400 Malus domestica
Medtr4g086640 Medicago truncatula
MELO3C018438.2 Cucumis melo
Migut.B00314 Erythranthe guttata
MSTRG.16763 Avicennia marina
Nitab4.5_0004334g0110 Nicotiana tabacum
Nitab4.5_0005583g0020 Nicotiana tabacum
Nn5g30192 Nelumbo nucifera
Oeu064516.1 Olea europaea
Os06g0215200 Oryza sativa ssp. japonica
Peaxi162Scf00016g01637 Petunia axillaris
PGR142G0644 Punica granatum
PGSC0003DMG400025811 Solanum tuberosum
Phvul.007G247000 Phaseolus vulgaris
Potri.009G105500 Populus trichocarpa
Pp3c14_26080 Physcomitrium patens
Prupe.8G119200 Prunus persica
Psat7g121840 Pisum sativum
PSO541G4058 Papaver somniferum
PSO675G5018 Papaver somniferum
QL11p037315 Quercus lobata
RcHm_v2.0_Chr6g0258731 Rosa chinensis
Rhsim11G0168500 Rhododendron simsii
Sabra09G0080600 Salix brachista
SalBow6G0615 Salvia bowleyana
Sc18g0004890 Simmondsia chinensis
Sed0011670 Sechium edule
SGA_v2.0_scaffold90G27688 Striga asiatica
SGA_v2.0_scaffold90G27693 Striga asiatica
SHI05379 Sapria himalayana
SMO367G0139 Selaginella moellendorffii
Solyc01g108430.3 Solanum lycopersicum
Sopen01g050660 Solanum pennellii
Sp1g36470 Schrenkiella parvula
TAR628G0388 Trochodendron aralioides
TAR628G1516 Trochodendron aralioides
Thecc.02G097400 Theobroma cacao
Thhalv10011741m.g Eutrema salsugineum
TPR.G23511 Trifolium pratense
TPR.G23531 Trifolium pratense
TWI31G0027 Tripterygium wilfordii
TWI79G0004 Tripterygium wilfordii
unitig_60.g25783 Utricularia gibba
vmacro02181 Vaccinium macrocarpon
Zm00001eb373090 Zea mays

User provided reference genes

Program Settings