Gene: Pp3c14_26080

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c14_26080
  • Transcript Identifier Pp3c14_26080V3.9
  • Gene Type Coding gene
  • Location Chr14 : 16722861-16725656 : negative

Gene Family Information

  • ID HOM05D006779
  • #Genes/#Species 119/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c14_26080V3.9
  • pacid 32962596
  • alias Phpat.014G101800
  • alias Pp1s269_13V6
  • alias Phypa_147981
  • uniprot A0A2K1JJB7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0009845
IEA
GOA Databaseseed germination
GO:0080188
IEA
GOA Databasegene silencing by RNA-directed DNA methylation
GO:0008380
IBA
IEA
GOA DatabaseRNA splicing
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G49590
GO:0003690
IEA
GOA Databasedouble-stranded DNA binding
GO:0003725
IEA
GOA Databasedouble-stranded RNA binding
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015030
IEA
GOA DatabaseCajal body
GO:0071011
IBA
GOA Databaseprecatalytic spliceosome
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041591 OCRE domain
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
IPR036236 Zinc finger C2H2 superfamily
IPR040023 WW domain-binding protein 4
IPR035622 ZOP1, OCRE domain
IPR013085 U1-C, C2H2-type zinc finger
Mapman id Description
35.1 not assigned.annotated