Gene: PGSC0003DMG400025811
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400025811
- Transcript Identifier PGSC0003DMT400066376
- Gene Type Coding gene
- Location ST4.03ch01 : 84828698-84832589 : positive
Gene Family Information
- ID HOM05D006779
- #Genes/#Species 119/92
- Phylogenetic origin
- ID ORTHO05D008491
- #Genes/#Species 118/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37440893
- id PGSC0003DMG400025811.v4.03
- uniprot M1CFH0
Descriptions
- Description Nucleic acid binding protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
GO:0009845 | IEA | GOA Database | seed germination | |
GO:0080188 | IEA | GOA Database | gene silencing by RNA-directed DNA methylation | |
GO:0008380 | IBA IEA | GOA Database | RNA splicing | |
GO:0006397 | IEA | GOA Database | mRNA processing |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G49590 |
GO:0003690 | IEA | GOA Database | double-stranded DNA binding | |
GO:0003725 | IEA | GOA Database | double-stranded RNA binding | |
GO:0003723 | IBA | GOA Database | RNA binding | |
GO:0008270 | IEA | GOA Database | zinc ion binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0003676 | IEA | GOA Database | nucleic acid binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0015030 | IEA | GOA Database | Cajal body | |
GO:0071011 | IBA | GOA Database | precatalytic spliceosome | |
GO:0005681 | IEA | GOA Database | spliceosomal complex | |
GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |