Gene: SGA_v2.0_scaffold90G27688

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold90G27688
Transcript Identifier SGA_v2.0_scaffold90T27688
Gene Type Coding gene
Location scaffold90 : 433712-435546 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006779
#Genes/#Species 119/92
Phylogenetic origin

ID ORTHO05D008491
#Genes/#Species 118/91
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product Formin-binding protein-related-like

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0008380	ISO	PLAZA Integrative Orthology	RNA splicing	AT1G49590
GO:0080188	ISO	PLAZA Integrative Orthology	gene silencing by RNA-directed DNA methylation	AT1G49590
GO:0009845	ISO	PLAZA Integrative Orthology	seed germination	AT1G49590

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G49590
GO:0003725	ISO	PLAZA Integrative Orthology	double-stranded RNA binding	AT1G49590
GO:0003690	ISO	PLAZA Integrative Orthology	double-stranded DNA binding	AT1G49590

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015030	ISO	PLAZA Integrative Orthology	Cajal body	AT1G49590

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR041591	OCRE domain
IPR013085	U1-C, C2H2-type zinc finger
IPR040023	WW domain-binding protein 4
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger

Mapman id	Description
35.1	not assigned.annotated