Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p30310 Brassica napus
A08p03340 Brassica napus
A09p25350 Brassica napus
Aa31LG9G9170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3905 Anthoceros agrestis
Actinidia13477 Actinidia chinensis
Actinidia13478 Actinidia chinensis
Actinidia36001 Actinidia chinensis
Ah.14g085710 Amaranthus hybridus
AL6G49000 Arabidopsis lyrata
AL7G32990 Arabidopsis lyrata
Aqoxy1G01607 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JS3IU7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MSHM5J Arachis hypogaea
AT4G05410 Arabidopsis thaliana
AT4G21130 Arabidopsis thaliana
ATR0165G031 Amborella trichopoda
Atru.chr10.888 Acer truncatum
AUR62033065 Chenopodium quinoa
AUR62042204 Chenopodium quinoa
BcaB01g02186 Brassica carinata
BcaB01g02559 Brassica carinata
BcaB03g11915 Brassica carinata
BcaB06g25383 Brassica carinata
BcaB07g31331 Brassica carinata
BcaC01g06663 Brassica carinata
BolC3t15973H Brassica oleracea
BolC6t38950H Brassica oleracea
BolC9t56080H Brassica oleracea
BraA03t12214Z Brassica rapa
BraA09t38117Z Brassica rapa
C03p36580 Brassica napus
C06p38580 Brassica napus
C08p21980 Brassica napus
C09p32350 Brassica napus
CAN.G954.23 Capsicum annuum
CARHR252170 Cardamine hirsuta
Carub.0006s3332 Capsella rubella
Ca_00807_v3 Cicer arietinum L.
CBR_g50978 Chara braunii
Cc09_g08220 Coffea canephora
CDE05G0927 Ceratophyllum demersum
Cfa016817 Carpinus fangiana
Cfa027057 Carpinus fangiana
Ciclev10014949m.g Citrus clementina
CiPaw.02G032400 Carya illinoinensis
CiPaw.04G138400 Carya illinoinensis
CiPaw.10G033400 Carya illinoinensis
ClCG08G001610 Citrullus lanatus
COL.COLO4_26825 Corchorus olitorius
Cpa.g.sc19.212 Carica papaya
Cre06.g278175 Chlamydomonas reinhardtii
CsaV3_5G039540 Cucumis sativus L.
CSS0044875 Camellia sinensis var. sinensis
DCAR_003859 Daucus carota
Dinv01990 Davidia involucrata
Dinv03058 Davidia involucrata
Duzib235G0447 Durio zibethinus
Duzib235G0476 Durio zibethinus
ECA234G3170 Erigeron canadensis
EL10Ac4g08968 Beta vulgaris
Eucgr.D00190 Eucalyptus grandis
FAN11G3706 Fragaria x ananassa
FAN16G1271 Fragaria x ananassa
FAN21G2832 Fragaria x ananassa
FAN25G3670 Fragaria x ananassa
FvH4_3g09990 Fragaria vesca
Glyma.09G023100 Glycine max
Glyma.15G129100 Glycine max
Gohir.A02G094000 Gossypium hirsutum
Gohir.D02G104300 Gossypium hirsutum
Gorai.005G118400 Gossypium raimondii
GSVIVG01021618001 Vitis vinifera
HanXRQChr13g0407861 Helianthus annuus
HanXRQChr17g0569471 Helianthus annuus
Haze_19855 Corylus avellana
Hma1.2p1_0333F.1_g128320 Hydrangea macrophylla
HPP92_013994 Vanilla planifolia
Hund22392 Selenicereus undatus
Lalb_Chr18g0057911 Lupinus albus
Lj6g0009484 Lotus japonicus
Lsat_1_v5_gn_4_3900 Lactuca sativa
Manes.13G081200 Manihot esculenta
Mapoly0012s0170 Marchantia polymorpha
MCO15G200 Micromonas commoda
MD05G1274300 Malus domestica
MD10G1254000 Malus domestica
Medtr2g029940 Medicago truncatula
MELO3C022131.2 Cucumis melo
Migut.H01334 Erythranthe guttata
MSTRG.13266 Avicennia marina
Nitab4.5_0002719g0080 Nicotiana tabacum
Nitab4.5_0004077g0020 Nicotiana tabacum
Nn5g27628 Nelumbo nucifera
Oeu020857.1 Olea europaea
Oeu030450.1 Olea europaea
Os03g0625900 Oryza sativa ssp. japonica
Peaxi162Scf00670g00332 Petunia axillaris
PGR083G2688 Punica granatum
PGSC0003DMG402021193 Solanum tuberosum
Phvul.006G129100 Phaseolus vulgaris
Potri.005G061000 Populus trichocarpa
Potri.007G107900 Populus trichocarpa
Pp3c13_22280 Physcomitrium patens
Pp3c15_1000 Physcomitrium patens
PRCOL_00004480 Prasinoderma coloniale
Prupe.4G089600 Prunus persica
Psat1g168120 Pisum sativum
PSO541G1457 Papaver somniferum
PSO675G8746 Papaver somniferum
QL03p009300 Quercus lobata
RcHm_v2.0_Chr5g0015871 Rosa chinensis
Rhsim13G0120200 Rhododendron simsii
Sabra05G0051400 Salix brachista
Sabra07G0088400 Salix brachista
SalBow7G3138 Salvia bowleyana
Sc24g0001380 Simmondsia chinensis
Sed0017304 Sechium edule
Sed0027243 Sechium edule
SGA_v2.0_scaffold106G30666 Striga asiatica
SMO146G0033 Selaginella moellendorffii
Solyc02g069770.3 Solanum lycopersicum
Sopen02g018930 Solanum pennellii
Sp6g03680 Schrenkiella parvula
TAR626G0701 Trochodendron aralioides
THA.LOC104806253 Tarenaya hassleriana
THA.LOC104812393 Tarenaya hassleriana
Thecc.06G000900 Theobroma cacao
Thhalv10028589m.g Eutrema salsugineum
TWI09G1293 Tripterygium wilfordii
TWI73G0023 Tripterygium wilfordii
unitig_8.g4887 Utricularia gibba
vmacro03396 Vaccinium macrocarpon
vmacro03440 Vaccinium macrocarpon
VMungo0540G0794 Vigna mungo
Zm00001eb050650 Zea mays
Zm00001eb218720 Zea mays

User provided reference genes

Program Settings