Gene: Lsat_1_v5_gn_4_3900

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_3900
  • Transcript Identifier Lsat_1_v5_gn_4_3900.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 5861638-5863873 : positive

Gene Family Information

  • ID HOM05D005639
  • #Genes/#Species 137/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_3900.v5
  • pacid 38930462

Descriptions

  • Description K14793 - ribosomal RNA-processing protein 9 (RRP9)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing
GO:0060321
ISO
PLAZA Integrative Orthologyacceptance of pollen AT4G05410
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G05410
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT4G05410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0034511
IEA
InterProU3 snoRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G05410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR039241 Ribosomal RNA-processing protein Rrp9-like
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
17.1.3.2.1.8 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (Rrp9/YAO1)