Gene: Sopen02g018930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g018930
  • Transcript Identifier Sopen02g018930.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 42868228-42876447 : positive

Gene Family Information

  • ID HOM05D005639
  • #Genes/#Species 137/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g018930.1

Descriptions

  • Description Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis. | YAOZHE (YAO) | FUNCTIONS IN: nucleotide binding, nucleic acid binding | INVOLVED IN: acceptance of pollen, mitochondrial fission, embryo sac development, embryo development ending in seed dormancy | LOCATED IN: nucleolus, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, CUL4 RING ubiquitin ligase complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing
GO:0060321
ISO
PLAZA Integrative Orthologyacceptance of pollen AT4G05410
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G05410
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT4G05410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034511
IEA
InterProU3 snoRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G05410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039241 Ribosomal RNA-processing protein Rrp9-like
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
17.1.3.2.1.8 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (Rrp9/YAO1)