Gene: PGSC0003DMG402021193

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG402021193
  • Transcript Identifier PGSC0003DMT400054611
  • Gene Type Coding gene
  • Location ST4.03ch02 : 28901439-28909501 : positive

Gene Family Information

  • ID HOM05D005639
  • #Genes/#Species 137/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37428239
  • id PGSC0003DMG402021193.v4.03
  • uniprot M1BWL8

Descriptions

  • Description U3 small nucleolar RNA-interacting protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0060321
ISO
PLAZA Integrative Orthologyacceptance of pollen AT4G05410
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G05410
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT4G05410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0034511
IEA
GOA DatabaseU3 snoRNA binding
GO:0034511
IEA
InterProU3 snoRNA binding
GO:0030515
IBA
GOA DatabasesnoRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032040
IBA
GOA Databasesmall-subunit processome
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G05410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR039241 Ribosomal RNA-processing protein Rrp9-like
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
17.1.3.2.1.8 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (Rrp9/YAO1)