Gene: FAN16G1271

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN16G1271
Transcript Identifier FAN16G1271.1
Gene Type Coding gene
Location Fvb3-3 : 3763068-3766548 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005639
#Genes/#Species 137/94
Phylogenetic origin

ID ORTHO05D007234
#Genes/#Species 133/94
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id snap_masked-Fvb3-3-processed-gene-37.22.v1.0.a1
pacid 50535202

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR19865//PTHR19865:SF0 - U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2 // U3 SMALL NUCLEOLAR RNA-INTERACTING PROTEIN 2

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006364	IEA	InterPro	rRNA processing
GO:0060321	ISO	PLAZA Integrative Orthology	acceptance of pollen	AT4G05410
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT4G05410
GO:0009553	ISO	PLAZA Integrative Orthology	embryo sac development	AT4G05410

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0034511	IEA	InterPro	U3 snoRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT4G05410

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001680	WD40 repeat
IPR039241	Ribosomal RNA-processing protein Rrp9-like
IPR036322	WD40-repeat-containing domain superfamily
IPR020472	G-protein beta WD-40 repeat
IPR015943	WD40/YVTN repeat-like-containing domain superfamily

Mapman id	Description
17.1.3.2.1.8	Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (Rrp9/YAO1)