Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28460 Brassica napus
Aa31LG9G14750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4012 Anthoceros agrestis
Actinidia24740 Actinidia chinensis
Ah.05g178620 Amaranthus hybridus
AL6G42870 Arabidopsis lyrata
Aqoxy6G00108 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0B02IH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QF83TB Arachis hypogaea
AT4G09140 Arabidopsis thaliana
ATR1136G132 Amborella trichopoda
ATR1136G152 Amborella trichopoda
Atru.chr13.2376 Acer truncatum
AUR62004596 Chenopodium quinoa
AUR62023548 Chenopodium quinoa
BcaB01g02803 Brassica carinata
BcaC01g04730 Brassica carinata
BolC3t15749H Brassica oleracea
BraA03t12051Z Brassica rapa
C03p34390 Brassica napus
CAN.G982.5 Capsicum annuum
CANSAT80G2649 Cannabis sativa
CARHR260140 Cardamine hirsuta
Carub.0006s2769 Capsella rubella
Ca_13983_v3 Cicer arietinum L.
CBR_g11107 Chara braunii
Cc10_g09470 Coffea canephora
CDE02G0285 Ceratophyllum demersum
CDE02G1671 Ceratophyllum demersum
CDE02G3660 Ceratophyllum demersum
Cfa009487 Carpinus fangiana
Cfa012974 Carpinus fangiana
Ciclev10019018m.g Citrus clementina
CiPaw.07G235300 Carya illinoinensis
ClCG08G002450 Citrullus lanatus
ClCG08G002460 Citrullus lanatus
COL.COLO4_24646 Corchorus olitorius
Cpa.g.sc50.54 Carica papaya
Cpa.g.sc50.56 Carica papaya
Cre01.g036050 Chlamydomonas reinhardtii
CsaV3_6G002720 Cucumis sativus L.
CSS0003964 Camellia sinensis var. sinensis
CSS0016165 Camellia sinensis var. sinensis
CSS0033470 Camellia sinensis var. sinensis
DCAR_017434 Daucus carota
DCAR_017435 Daucus carota
Dinv08418 Davidia involucrata
Dinv16440 Davidia involucrata
Dinv21366 Davidia involucrata
Dinv41761 Davidia involucrata
Dinv41762 Davidia involucrata
Duzib177G0512 Durio zibethinus
ECA232G1421 Erigeron canadensis
EL10Ac1g00141 Beta vulgaris
Eucgr.F02988 Eucalyptus grandis
FAN04G2711 Fragaria x ananassa
FAN18G4563 Fragaria x ananassa
FvH4_5g31560 Fragaria vesca
Glyma.04G254900 Glycine max
Glyma.19G059900 Glycine max
Gohir.A13G118900 Gossypium hirsutum
Gohir.D13G122700 Gossypium hirsutum
Gorai.013G137700 Gossypium raimondii
GSVIVG01026715001 Vitis vinifera
HanXRQChr07g0194581 Helianthus annuus
HanXRQChr09g0266431 Helianthus annuus
Haze_21326 Corylus avellana
Hma1.2p1_0004F.1_g003900 Hydrangea macrophylla
HPP92_004621 Vanilla planifolia
HPP92_004622 Vanilla planifolia
Hund27128 Selenicereus undatus
Hund27133 Selenicereus undatus
Lalb_Chr07g0189291 Lupinus albus
Lalb_Chr18g0049141 Lupinus albus
Lj3g0002821 Lotus japonicus
Lj7A285T59 Lonicera japonica
Lj7C285G2 Lonicera japonica
Lsat_1_v5_gn_1_31200 Lactuca sativa
Lsat_1_v5_gn_1_32860 Lactuca sativa
Lsat_1_v5_gn_2_103881 Lactuca sativa
Lsat_1_v5_gn_2_95080 Lactuca sativa
Lsat_1_v5_gn_2_95100 Lactuca sativa
Lsat_1_v5_gn_4_131700 Lactuca sativa
Lsat_1_v5_gn_8_103720 Lactuca sativa
Manes.02G198901 Manihot esculenta
Mapoly0086s0067 Marchantia polymorpha
MBI02_g45292_MAGBIO Magnolia biondii
MBI03_g18676_MAGBIO Magnolia biondii
MCO16G484 Micromonas commoda
MD12G1033300 Malus domestica
MD14G1034100 Malus domestica
MD14G1034200 Malus domestica
Medtr3g005810 Medicago truncatula
MELO3C025009.2 Cucumis melo
Migut.C01329 Erythranthe guttata
MSTRG.25478 Avicennia marina
Nitab4.5_0006434g0010 Nicotiana tabacum
Nitab4.5_0008566g0030 Nicotiana tabacum
Nn1g08386 Nelumbo nucifera
Nn1g08422 Nelumbo nucifera
Oeu006599.1 Olea europaea
Oeu042240.1 Olea europaea
Oeu059199.1 Olea europaea
Os01g0958900 Oryza sativa ssp. japonica
Peaxi162Scf00076g10023 Petunia axillaris
PGR042G0738 Punica granatum
PGSC0003DMG401015043 Solanum tuberosum
PGSC0003DMG402015043 Solanum tuberosum
Phvul.005G002000 Phaseolus vulgaris
Potri.019G078700 Populus trichocarpa
Pp3c10_9000 Physcomitrium patens
PRCOL_00005034 Prasinoderma coloniale
Prupe.1G555900 Prunus persica
Psat1g008120 Pisum sativum
PSO170G3966 Papaver somniferum
PSO782G1799 Papaver somniferum
RcHm_v2.0_Chr3g0494621 Rosa chinensis
RcHm_v2.0_Chr7g0226931 Rosa chinensis
Rhsim03G0213900 Rhododendron simsii
Rhsim12G0006000 Rhododendron simsii
RhsimUnG0011300 Rhododendron simsii
Sabra19G0089500 Salix brachista
SalBow7G4073 Salvia bowleyana
Sc01g0002020 Simmondsia chinensis
Sed0005919 Sechium edule
Sed0025467 Sechium edule
Sed0027029 Sechium edule
SEGI_07557 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32566 Striga asiatica
SHI12388 Sapria himalayana
SMO340G0005 Selaginella moellendorffii
Solyc04g045660.4 Solanum lycopersicum
Sopen04g017660 Solanum pennellii
Sp6g08400 Schrenkiella parvula
TAR381G0263 Trochodendron aralioides
Thecc.08G192800 Theobroma cacao
Thhalv10028465m.g Eutrema salsugineum
TPR.G25526 Trifolium pratense
TWI59G0173 Tripterygium wilfordii
unitig_26.g9865 Utricularia gibba
vmacro00977 Vaccinium macrocarpon
VMungo1080G0256 Vigna mungo
Zm00001eb362590 Zea mays

User provided reference genes

Program Settings