Gene: PGR042G0738

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR042G0738
  • Transcript Identifier PGR042G0738.03
  • Gene Type Coding gene
  • Location NC_045130.1 : 7104112-7113883 : positive

Gene Family Information

  • ID HOM05D005290
  • #Genes/#Species 143/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031389746.1
  • name LOC116202358
  • name XM_031533886.1
  • id gene-LOC116202358
  • uniprot A0A6P8D068

Descriptions

  • product DNA mismatch repair protein MLH1, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0006312
ISO
PLAZA Integrative Orthologymitotic recombination AT4G09140
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G09140
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G09140
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G09140
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G09140
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT4G09140
GO:0032300
IEA
GOA Databasemismatch repair complex
GO:0032300
IEA
InterPromismatch repair complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013507 DNA mismatch repair protein, S5 domain 2-like
IPR032189 DNA mismatch repair protein Mlh1, C-terminal
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR038973 DNA mismatch repair protein MutL/Mlh/Pms
IPR002099 DNA mismatch repair protein family, N-terminal
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
Mapman id Description
14.7.2.1 DNA damage response.mismatch repair (MMR).MLH1-PMS1 heterodimer.component MLH1