Gene: Cc10_g09470
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc10_g09470
- Transcript Identifier Cc10_g09470.1
- Gene Type Coding gene
- Location chr10 : 9698813-9712169 : negative
Gene Family Information
- ID HOM05D005290
- #Genes/#Species 143/98
- Phylogenetic origin
- ID ORTHO05D006040
- #Genes/#Species 148/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB Q9JK91
- UniProtKB P40692
- UniProtKB Q9C5F9
- UniProtKB Q9ZRV4
- UniProtKB P97679
- UniProtKB B9IQE4
- id GSCOCG00031539001
Descriptions
- Description Putative DNA mismatch repair protein Mlh1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | InterPro | mismatch repair | |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT4G09140 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G09140 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT4G09140 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT4G09140 |
| GO:0006312 | ISO | PLAZA Integrative Orthology | mitotic recombination | AT4G09140 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032300 | IEA | InterPro | mismatch repair complex | |
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT4G09140 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038973 | DNA mismatch repair protein MutL/Mlh/Pms |
| IPR036890 | Histidine kinase/HSP90-like ATPase superfamily |
| IPR002099 | DNA mismatch repair protein family, N-terminal |
| IPR013507 | DNA mismatch repair protein, S5 domain 2-like |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR032189 | DNA mismatch repair protein Mlh1, C-terminal |
| Mapman id | Description |
|---|---|
| 14.7.2.1 | DNA damage response.mismatch repair (MMR).MLH1-PMS1 heterodimer.component MLH1 |