Gene: Cpa.g.sc50.54
General Information
Structural Information
- Species Carica papaya
- Gene Identifier Cpa.g.sc50.54
- Transcript Identifier Cpa.t.sc50.54
- Gene Type Coding gene
- Location supercontig_50 : 600807-607447 : positive
Gene Family Information
- ID HOM05D005290
- #Genes/#Species 143/98
- Phylogenetic origin
- ID ORTHO05D006040
- #Genes/#Species 148/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 16421676
- tid PAC:16421676
- id evm.TU.supercontig_50.54
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | InterPro | mismatch repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032300 | IEA | InterPro | mismatch repair complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013507 | DNA mismatch repair protein, S5 domain 2-like |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR036890 | Histidine kinase/HSP90-like ATPase superfamily |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR002099 | DNA mismatch repair protein family, N-terminal |
| IPR038973 | DNA mismatch repair protein MutL/Mlh/Pms |
| Mapman id | Description |
|---|---|
| 14.7.2.1 | DNA damage response.mismatch repair (MMR).MLH1-PMS1 heterodimer.component MLH1 |