Gene: Sp6g08400

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp6g08400
  • Transcript Identifier Sp6g08400.1
  • Gene Type Coding gene
  • Location ch6-2 : 905975-909827 : positive

Gene Family Information

  • ID HOM05D005290
  • #Genes/#Species 143/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp6g08400.v2.2
  • pacid 45085900

Descriptions

  • Description K08734 - DNA mismatch repair protein MLH1 (MLH1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G09140
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G09140
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G09140
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G09140
GO:0006312
ISO
PLAZA Integrative Orthologymitotic recombination AT4G09140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032300
IEA
InterPromismatch repair complex
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT4G09140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002099 DNA mismatch repair protein family, N-terminal
IPR032189 DNA mismatch repair protein Mlh1, C-terminal
IPR013507 DNA mismatch repair protein, S5 domain 2-like
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR038973 DNA mismatch repair protein MutL/Mlh/Pms
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Mapman id Description
14.7.2.1 DNA damage response.mismatch repair (MMR).MLH1-PMS1 heterodimer.component MLH1