Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47380 Brassica napus
Aa31LG5G3040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2111 Anthoceros agrestis
Actinidia06452 Actinidia chinensis
Actinidia22276 Actinidia chinensis
Ah.11g045690 Amaranthus hybridus
AL8G15820 Arabidopsis lyrata
Aqoxy1G02310 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RWFH5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UE89WV Arachis hypogaea
AT5G44200 Arabidopsis thaliana
ATR0665G079 Amborella trichopoda
ATR0665G640 Amborella trichopoda
Atru.chr6.2876 Acer truncatum
AUR62010400 Chenopodium quinoa
AUR62010418 Chenopodium quinoa
AUR62010422 Chenopodium quinoa
AUR62016818 Chenopodium quinoa
BcaB07g30541 Brassica carinata
BcaC06g31640 Brassica carinata
BcaC06g34582 Brassica carinata
BolC7t43217H Brassica oleracea
BraA06t27608Z Brassica rapa
C07p26890 Brassica napus
CAN.G53.9 Capsicum annuum
CANSAT64G0803 Cannabis sativa
CARHR179060 Cardamine hirsuta
Carub.0008s0432 Capsella rubella
Ca_01483_v3 Cicer arietinum L.
CBR_g4062 Chara braunii
Cc10_g09480 Coffea canephora
Cc10_g09490 Coffea canephora
Cfa022862 Carpinus fangiana
Ciclev10016365m.g Citrus clementina
CiPaw.03G180900 Carya illinoinensis
CiPaw.04G128700 Carya illinoinensis
ClCG02G009520 Citrullus lanatus
ClCG09G011570 Citrullus lanatus
COL.COLO4_18047 Corchorus olitorius
Cpa.g.sc83.87 Carica papaya
Cpa.g.sc83.88 Carica papaya
Cre10.g437850 Chlamydomonas reinhardtii
CsaV3_4G010150 Cucumis sativus L.
CSS0035973 Camellia sinensis var. sinensis
DCAR_018109 Daucus carota
Dinv21367 Davidia involucrata
Duzib052G0667 Durio zibethinus
Duzib132G0012 Durio zibethinus
Duzib132G0108 Durio zibethinus
ECA238G0369 Erigeron canadensis
EL10Ac3g06463 Beta vulgaris
EL10Ac5g12160 Beta vulgaris
EL10Ac7g17400 Beta vulgaris
EL10As5g23592 Beta vulgaris
EL10As7g23802 Beta vulgaris
Eucgr.K01050 Eucalyptus grandis
FAN02G3272 Fragaria x ananassa
FAN05G0301 Fragaria x ananassa
FAN09G4502 Fragaria x ananassa
FAN14G3298 Fragaria x ananassa
FvH4_6g26630 Fragaria vesca
Glyma.12G206400 Glycine max
Glyma.13G294500 Glycine max
Gohir.A03G154800 Gossypium hirsutum
Gohir.A11G293700 Gossypium hirsutum
Gohir.D02G177800 Gossypium hirsutum
Gorai.005G199600 Gossypium raimondii
GSVIVG01020599001 Vitis vinifera
GSVIVG01020600001 Vitis vinifera
HanXRQChr07g0195561 Helianthus annuus
HanXRQChr14g0454161 Helianthus annuus
HanXRQChr14g0454171 Helianthus annuus
HPP92_007900 Vanilla planifolia
Hund09671 Selenicereus undatus
Lalb_Chr14g0367111 Lupinus albus
Lalb_Chr22g0356721 Lupinus albus
Lj3g0003979 Lotus japonicus
Lj7A285G44 Lonicera japonica
Lsat_1_v5_gn_2_108860 Lactuca sativa
Lsat_1_v5_gn_4_146681 Lactuca sativa
Manes.13G142600 Manihot esculenta
Mapoly0001s0392 Marchantia polymorpha
MBI07_g29116_MAGBIO Magnolia biondii
MCO12G258 Micromonas commoda
MD09G1242300 Malus domestica
MD17G1234600 Malus domestica
Medtr2g090655 Medicago truncatula
MELO3C026304.2 Cucumis melo
Migut.C01328 Erythranthe guttata
MSTRG.25482 Avicennia marina
Nitab4.5_0000016g0640 Nicotiana tabacum
Nitab4.5_0000016g0650 Nicotiana tabacum
Nitab4.5_0000061g0200 Nicotiana tabacum
Nitab4.5_0000556g0280 Nicotiana tabacum
Nitab4.5_0002677g0020 Nicotiana tabacum
Nitab4.5_0005272g0060 Nicotiana tabacum
Nitab4.5_0007033g0060 Nicotiana tabacum
Nitab4.5_0008100g0020 Nicotiana tabacum
Nitab4.5_0012603g0010 Nicotiana tabacum
Nn1g06427 Nelumbo nucifera
Os02g0612300 Oryza sativa ssp. japonica
Peaxi162Scf00688g00358 Petunia axillaris
PGR142G3950 Punica granatum
Phvul.005G100900 Phaseolus vulgaris
Potri.007G137400 Populus trichocarpa
Potri.017G014600 Populus trichocarpa
Pp3c17_11470 Physcomitrium patens
PRCOL_00004370 Prasinoderma coloniale
Prupe.3G134700 Prunus persica
Psat5g273600 Pisum sativum
Psat5g283320 Pisum sativum
PSO541G1716 Papaver somniferum
PSO675G4288 Papaver somniferum
RcHm_v2.0_Chr2g0127331 Rosa chinensis
RcHm_v2.0_Chr2g0127341 Rosa chinensis
Rhsim05G0079400 Rhododendron simsii
Sabra05G0033000 Salix brachista
Sabra17G0011800 Salix brachista
SalBow7G4324 Salvia bowleyana
Sc04g0004750 Simmondsia chinensis
Sc04g0004760 Simmondsia chinensis
Sc04g0004790 Simmondsia chinensis
Sc21g0003210 Simmondsia chinensis
Sc21g0003220 Simmondsia chinensis
Sed0010388 Sechium edule
SEGI_07457 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32565 Striga asiatica
SHI10494 Sapria himalayana
SMO339G0037 Selaginella moellendorffii
Solyc02g062620.3 Solanum lycopersicum
Sopen02g013640 Solanum pennellii
Sopen02g013650 Solanum pennellii
Sp2g09020 Schrenkiella parvula
TAR627G0282 Trochodendron aralioides
THA.LOC104801162 Tarenaya hassleriana
Thecc.02G185300 Theobroma cacao
Thhalv10003260m.g Eutrema salsugineum
TPR.G6465 Trifolium pratense
TWI23G0861 Tripterygium wilfordii
TWI59G0090 Tripterygium wilfordii
unitig_37.g13100 Utricularia gibba
vmacro09001 Vaccinium macrocarpon
vmacro09002 Vaccinium macrocarpon
VMungo1080G0911 Vigna mungo
Zm00001eb184540 Zea mays
Zm00001eb246940 Zea mays
Zm00001eb355920 Zea mays

User provided reference genes

Program Settings