Gene: Ah.11g045690
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g045690
- Transcript Identifier Ah.11g045690-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 14998127-15002803 : negative
Gene Family Information
- ID HOM05D005106
- #Genes/#Species 147/94
- Phylogenetic origin
- ID ORTHO05D006224
- #Genes/#Species 146/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.11g045690-v1.1.a1
Descriptions
- Description Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (AtCBP20)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0045292 | IEA | InterPro | mRNA cis splicing, via spliceosome | |
GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | AT5G44200 |
GO:0000394 | ISO | PLAZA Integrative Orthology | RNA splicing, via endonucleolytic cleavage and ligation | AT5G44200 |
GO:0031053 | ISO | PLAZA Integrative Orthology | primary miRNA processing | AT5G44200 |
GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT5G44200 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000339 | IEA | InterPro | RNA cap binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G44200 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005846 | IEA | InterPro | nuclear cap binding complex | |
GO:0005845 | ISO | PLAZA Integrative Orthology | mRNA cap binding complex | AT5G44200 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.1.3.2 | RNA processing.RNA 5'-end capping.CBP80-CBP20 mRNA Cap-Binding complex (CBC).component CBP20 |