Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36370 Brassica napus
A02p42430 Brassica napus
A05p26160 Brassica napus
A09p57840 Brassica napus
Aa31LG7G14640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.911 Anthoceros agrestis
Actinidia15577 Actinidia chinensis
Ah.02g124390 Amaranthus hybridus
Ah.02g124400 Amaranthus hybridus
AL4G11330 Arabidopsis lyrata
Aqoxy6G00493 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M2IALY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZQBN5H Arachis hypogaea
AT2G22010 Arabidopsis thaliana
ATR0564G436 Amborella trichopoda
Atru.chr4.387 Acer truncatum
AUR62003312 Chenopodium quinoa
AUR62016271 Chenopodium quinoa
BcaB08g35028 Brassica carinata
BcaC04g21885 Brassica carinata
BcaC06g36156 Brassica carinata
BcaC07g41106 Brassica carinata
BcaC09g48952 Brassica carinata
BolC7t41133H Brassica oleracea
BolC8t51674H Brassica oleracea
BolC9t55523H Brassica oleracea
BraA01t04208Z Brassica rapa
BraA02t09174Z Brassica rapa
BraA09t41177Z Brassica rapa
C01p44130 Brassica napus
C07p07140 Brassica napus
C08p41080 Brassica napus
C09p26200 Brassica napus
CAN.G1728.1 Capsicum annuum
CANSAT01G0647 Cannabis sativa
CARHR113090 Cardamine hirsuta
Carub.0004s0115 Capsella rubella
Ca_16889_v3 Cicer arietinum L.
CBR_g4334 Chara braunii
Cc07_g14920 Coffea canephora
Cc07_g16070 Coffea canephora
CDE04G1796 Ceratophyllum demersum
CDE07G0820 Ceratophyllum demersum
Ciclev10024728m.g Citrus clementina
CiPaw.04G092800 Carya illinoinensis
ClCG01G016180 Citrullus lanatus
COL.COLO4_11028 Corchorus olitorius
Cpa.g.sc196.6 Carica papaya
Cpa.g.sc196.7 Carica papaya
Cre12.g519150 Chlamydomonas reinhardtii
CsaV3_6G042450 Cucumis sativus L.
CSS0002284 Camellia sinensis var. sinensis
CSS0018271 Camellia sinensis var. sinensis
DCAR_014257 Daucus carota
Dinv19497 Davidia involucrata
Duzib147G0760 Durio zibethinus
ECA238G3208 Erigeron canadensis
EL10Ac6g14746 Beta vulgaris
Eucgr.H04838 Eucalyptus grandis
FAN01G2715 Fragaria x ananassa
FAN03G2613 Fragaria x ananassa
FAN06G3019 Fragaria x ananassa
FAN06G4447 Fragaria x ananassa
FAN10G0201 Fragaria x ananassa
FAN19G0866 Fragaria x ananassa
FAN23G3027 Fragaria x ananassa
FAN26G2351 Fragaria x ananassa
FAN28G2703 Fragaria x ananassa
FvH4_1g22150 Fragaria vesca
FvH4_7g04730 Fragaria vesca
FvH4_7g04731 Fragaria vesca
Glyma.04G220000 Glycine max
Glyma.06G145900 Glycine max
Gohir.A10G086600 Gossypium hirsutum
Gohir.D10G102100 Gossypium hirsutum
Gorai.011G111800 Gossypium raimondii
GSVIVG01022217001 Vitis vinifera
HanXRQChr10g0295251 Helianthus annuus
HanXRQChr11g0324541 Helianthus annuus
HanXRQChr11g0341101 Helianthus annuus
HanXRQChr12g0385291 Helianthus annuus
HanXRQChr14g0446191 Helianthus annuus
Haze_25029 Corylus avellana
HPP92_016847 Vanilla planifolia
HPP92_016848 Vanilla planifolia
Hund19660 Selenicereus undatus
Lalb_Chr11g0068041 Lupinus albus
Lalb_Chr13g0296191 Lupinus albus
Lj1g0000337 Lotus japonicus
Lj2A562T49 Lonicera japonica
Lj2C562G3 Lonicera japonica
Lsat_1_v5_gn_2_65401 Lactuca sativa
Manes.12G141800 Manihot esculenta
Manes.13G077640 Manihot esculenta
Mapoly0047s0138 Marchantia polymorpha
MBI02_g13022_MAGBIO Magnolia biondii
MBI02_g44126_MAGBIO Magnolia biondii
MCO16G187 Micromonas commoda
MD01G1017400 Malus domestica
MD15G1333600 Malus domestica
Medtr3g094770 Medicago truncatula
MELO3C007488.2 Cucumis melo
Migut.H02425 Erythranthe guttata
MSTRG.2539 Avicennia marina
Nitab4.5_0000156g0190 Nicotiana tabacum
Nitab4.5_0000904g0190 Nicotiana tabacum
Nitab4.5_0010573g0010 Nicotiana tabacum
Nn5g28922 Nelumbo nucifera
Oeu028379.4 Olea europaea
Oeu030684.1 Olea europaea
Oeu030685.1 Olea europaea
Os03g0428000 Oryza sativa ssp. japonica
Os07g0626900 Oryza sativa ssp. japonica
Peaxi162Scf00323g00112 Petunia axillaris
PGR102G1404 Punica granatum
PGSC0003DMG400012951 Solanum tuberosum
Phvul.009G140100 Phaseolus vulgaris
Potri.005G083800 Populus trichocarpa
Potri.007G081900 Populus trichocarpa
Pp3c17_14550 Physcomitrium patens
Pp3c1_33900 Physcomitrium patens
Pp3c2_2760 Physcomitrium patens
Prupe.6G174100 Prunus persica
Psat5g065960 Pisum sativum
PSO541G0735 Papaver somniferum
PSO675G8458 Papaver somniferum
QL06p032401 Quercus lobata
RcHm_v2.0_Chr2g0116231 Rosa chinensis
Rhsim10G0151300 Rhododendron simsii
Sabra05G0068900 Salix brachista
Sabra07G0068700 Salix brachista
SalBow6G4347 Salvia bowleyana
Sed0015455 Sechium edule
SEGI_33214 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01299 Striga asiatica
SMO143G0116 Selaginella moellendorffii
Solyc04g054140.4 Solanum lycopersicum
Solyc05g055570.3 Solanum lycopersicum
Sopen04g023580 Solanum pennellii
Sp4g01070 Schrenkiella parvula
TAR376G0110 Trochodendron aralioides
TAR628G0415 Trochodendron aralioides
THA.LOC104804146 Tarenaya hassleriana
Thecc.01G111200 Theobroma cacao
Thhalv10000015m.g Eutrema salsugineum
TPR.G23744 Trifolium pratense
TWI74G1507 Tripterygium wilfordii
unitig_899.g14600 Utricularia gibba
vmacro12908 Vaccinium macrocarpon
VMungo1309G2704 Vigna mungo
Zm00001eb137300 Zea mays
Zm00001eb328050 Zea mays

User provided reference genes

Program Settings