Gene: Nitab4.5_0000156g0190
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0000156g0190
- Transcript Identifier Nitab4.5_0000156g0190.1
- Gene Type Coding gene
- Location Nitab4.5_0000156 : 1191176-1197807 : positive
Gene Family Information
- ID HOM05D004874
- #Genes/#Species 152/95
- Phylogenetic origin
- ID ORTHO05D006796
- #Genes/#Species 138/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0000156g0190.1
- SR1-identifier Nta10g06830.1
Descriptions
- Description B30.2/SPRY domain, Ubiquitin conjugation factor E4, core, Concanavalin A-like lectin/glucanases superfamily, SPla/RYanodine receptor subgroup, SPla/RYanodine receptor SPRY
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:2000060 | ISO | PLAZA Integrative Orthology | positive regulation of ubiquitin-dependent protein catabolic process | AT2G22010 |
| GO:0030163 | ISO | PLAZA Integrative Orthology | protein catabolic process | AT2G22010 |
| GO:0051726 | ISO | PLAZA Integrative Orthology | regulation of cell cycle | AT2G22010 |
| GO:0009615 | ISO | PLAZA Integrative Orthology | response to virus | AT2G22010 |
| GO:0051603 | ISO | PLAZA Integrative Orthology | proteolysis involved in cellular protein catabolic process | AT2G22010 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0034450 | IEA | InterPro | ubiquitin-ubiquitin ligase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0061630 | ISO | PLAZA Integrative Orthology | ubiquitin protein ligase activity | AT2G22010 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000151 | IEA | InterPro | ubiquitin ligase complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR045129 | E3 ubiquitin-protein ligase RNF123/RSPRY1-like |
| IPR035773 | Ring finger protein 123, SPRY domain |
| IPR043136 | B30.2/SPRY domain superfamily |
| IPR019474 | Ubiquitin conjugation factor E4, core |
| IPR003877 | SPRY domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |