Gene: CSS0002284
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0002284
- Transcript Identifier CSS0002284.1
- Gene Type Coding gene
- Location Chr1 : 152461273-152474988 : positive
Gene Family Information
- ID HOM05D004874
- #Genes/#Species 152/95
- Phylogenetic origin
- ID ORTHO05D006796
- #Genes/#Species 138/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0002284.1
Descriptions
- Description PREDICTED: E3 ubiquitin-protein ligase RKP [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:2000060 | ISO | PLAZA Integrative Orthology | positive regulation of ubiquitin-dependent protein catabolic process | AT2G22010 |
| GO:0030163 | ISO | PLAZA Integrative Orthology | protein catabolic process | AT2G22010 |
| GO:0051726 | ISO | PLAZA Integrative Orthology | regulation of cell cycle | AT2G22010 |
| GO:0009615 | ISO | PLAZA Integrative Orthology | response to virus | AT2G22010 |
| GO:0051603 | ISO | PLAZA Integrative Orthology | proteolysis involved in cellular protein catabolic process | AT2G22010 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034450 | IEA | InterPro | ubiquitin-ubiquitin ligase activity | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0061630 | ISO | PLAZA Integrative Orthology | ubiquitin protein ligase activity | AT2G22010 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000151 | IEA | InterPro | ubiquitin ligase complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR019474 | Ubiquitin conjugation factor E4, core |
| IPR045129 | E3 ubiquitin-protein ligase RNF123/RSPRY1-like |
| IPR003877 | SPRY domain |
| IPR035773 | Ring finger protein 123, SPRY domain |
| IPR043136 | B30.2/SPRY domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |