Gene: CSS0018271
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0018271
- Transcript Identifier CSS0018271.1
- Gene Type Coding gene
- Location Chr1 : 152217345-152231038 : positive
Gene Family Information
- ID HOM05D004874
- #Genes/#Species 152/95
- Phylogenetic origin
- ID ORTHO05D006796
- #Genes/#Species 138/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0018271.1
Descriptions
- Description PREDICTED: E3 ubiquitin-protein ligase RKP [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
GO:0016567 | IEA | InterPro | protein ubiquitination | |
GO:2000060 | ISO | PLAZA Integrative Orthology | positive regulation of ubiquitin-dependent protein catabolic process | AT2G22010 |
GO:0030163 | ISO | PLAZA Integrative Orthology | protein catabolic process | AT2G22010 |
GO:0051726 | ISO | PLAZA Integrative Orthology | regulation of cell cycle | AT2G22010 |
GO:0009615 | ISO | PLAZA Integrative Orthology | response to virus | AT2G22010 |
GO:0051603 | ISO | PLAZA Integrative Orthology | proteolysis involved in cellular protein catabolic process | AT2G22010 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
GO:0034450 | IEA | InterPro | ubiquitin-ubiquitin ligase activity | |
GO:0061630 | ISO | PLAZA Integrative Orthology | ubiquitin protein ligase activity | AT2G22010 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000151 | IEA | InterPro | ubiquitin ligase complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR043136 | B30.2/SPRY domain superfamily |
IPR035773 | Ring finger protein 123, SPRY domain |
IPR013083 | Zinc finger, RING/FYVE/PHD-type |
IPR003877 | SPRY domain |
IPR045129 | E3 ubiquitin-protein ligase RNF123/RSPRY1-like |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
IPR019474 | Ubiquitin conjugation factor E4, core |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |