Gene: Sopen04g023580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g023580
  • Transcript Identifier Sopen04g023580.2
  • Gene Type Coding gene
  • Location Spenn-ch04 : 62687188-62696905 : negative

Gene Family Information

  • ID HOM05D004874
  • #Genes/#Species 152/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g023580.2

Descriptions

  • Description Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein. | related to KPC1 (RKP) | FUNCTIONS IN: zinc ion binding | INVOLVED IN: regulation of cell cycle, response to virus, proteolysis involved in cellular protein catabolic process | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , SPla/RYanodine receptor subgroup , B302 (SPRY)-like , SPla/RYanodine receptor SPRY .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0016567
IEA
InterProprotein ubiquitination
GO:2000060
ISO
PLAZA Integrative Orthologypositive regulation of ubiquitin-dependent protein catabolic process AT2G22010
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT2G22010
GO:0051726
ISO
PLAZA Integrative Orthologyregulation of cell cycle AT2G22010
GO:0009615
ISO
PLAZA Integrative Orthologyresponse to virus AT2G22010
GO:0051603
ISO
PLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic process AT2G22010

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0034450
IEA
InterProubiquitin-ubiquitin ligase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT2G22010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
IEA
InterProubiquitin ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003877 SPRY domain
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR019474 Ubiquitin conjugation factor E4, core
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR035773 Ring finger protein 123, SPRY domain
IPR043136 B30.2/SPRY domain superfamily
IPR045129 E3 ubiquitin-protein ligase RNF123/RSPRY1-like
Mapman id Description
35.1 not assigned.annotated