Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37470 Brassica napus
A09p68340 Brassica napus
Aa31LG1G9390 Aethionema arabicum
Actinidia00769 Actinidia chinensis
Actinidia10913 Actinidia chinensis
Ah.01g007480 Amaranthus hybridus
Ah.01g024010 Amaranthus hybridus
AL1G12610 Arabidopsis lyrata
AL1G45340 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.HALK3W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JHLY8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NQ54M2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2D3U2 Arachis hypogaea
AT1G03140 Arabidopsis thaliana
AT1G54590 Arabidopsis thaliana
Atru.chr5.1456 Acer truncatum
AUR62012894 Chenopodium quinoa
AUR62027118 Chenopodium quinoa
BcaC07g42265 Brassica carinata
BcaC08g43579 Brassica carinata
BolC6t36051H Brassica oleracea
BolC8t46841H Brassica oleracea
BolC8t52807H Brassica oleracea
BraA08t35645Z Brassica rapa
BraA09t42170Z Brassica rapa
C06p09790 Brassica napus
C08p00420 Brassica napus
C08p52910 Brassica napus
CAN.G198.19 Capsicum annuum
CAN.G590.6 Capsicum annuum
CANSAT25G3765 Cannabis sativa
CARHR002470 Cardamine hirsuta
CARHR182160 Cardamine hirsuta
Carub.0001s0228 Capsella rubella
Ca_08606_v3 Cicer arietinum L.
CBR_g23335 Chara braunii
Cc03_g10020 Coffea canephora
Ciclev10020348m.g Citrus clementina
CiPaw.08G106000 Carya illinoinensis
COL.COLO4_09079 Corchorus olitorius
Cpa.g.sc52.45 Carica papaya
Cpa.g.sc52.46 Carica papaya
Cre13.g567750 Chlamydomonas reinhardtii
CsaV3_7G028060 Cucumis sativus L.
CSS0006431 Camellia sinensis var. sinensis
Dinv32923 Davidia involucrata
Duzib138G0452 Durio zibethinus
Duzib211G0468 Durio zibethinus
ECA248G2754 Erigeron canadensis
EL10Ac8g18597 Beta vulgaris
Eucgr.K03365 Eucalyptus grandis
FAN15G1635 Fragaria x ananassa
FAN20G0972 Fragaria x ananassa
FAN24G1940 Fragaria x ananassa
FAN27G0992 Fragaria x ananassa
FvH4_2g23380 Fragaria vesca
Glyma.03G155000 Glycine max
Glyma.19G157200 Glycine max
Gohir.A08G066300 Gossypium hirsutum
Gohir.A08G186300 Gossypium hirsutum
Gohir.D05G222300 Gossypium hirsutum
Gohir.D08G075000 Gossypium hirsutum
Gohir.D08G204400 Gossypium hirsutum
Gohir.D11G242500 Gossypium hirsutum
Gorai.004G079300 Gossypium raimondii
Gorai.004G216400 Gossypium raimondii
Gorai.009G229700 Gossypium raimondii
Gorai.011G187700 Gossypium raimondii
GSVIVG01001158001 Vitis vinifera
HanXRQChr01g0003021 Helianthus annuus
HanXRQChr11g0330911 Helianthus annuus
HanXRQChr15g0487721 Helianthus annuus
HPP92_018354 Vanilla planifolia
Lalb_Chr02g0142711 Lupinus albus
Lalb_Chr06g0162971 Lupinus albus
Lj1g0027313 Lotus japonicus
Lj4g0011679 Lotus japonicus
Lj4g0024215 Lotus japonicus
Lsat_1_v5_gn_5_187781 Lactuca sativa
Manes.01G206900 Manihot esculenta
Mapoly0140s0012 Marchantia polymorpha
MCO06G052 Micromonas commoda
MD03G1263300 Malus domestica
MD11G1284100 Malus domestica
Medtr7g095000 Medicago truncatula
MELO3C015826.2 Cucumis melo
Migut.N02046 Erythranthe guttata
MSTRG.17449 Avicennia marina
Nitab4.5_0003327g0040 Nicotiana tabacum
Nitab4.5_0003852g0050 Nicotiana tabacum
Nn4g23784 Nelumbo nucifera
Nn4g26288 Nelumbo nucifera
Oeu028072.3 Olea europaea
Oeu041704.1 Olea europaea
Os03g0701100 Oryza sativa ssp. japonica
Os07g0571900 Oryza sativa ssp. japonica
PGR044G0684 Punica granatum
PGSC0003DMG400010600 Solanum tuberosum
PGSC0003DMG400010602 Solanum tuberosum
PGSC0003DMG400019362 Solanum tuberosum
Phvul.005G035400 Phaseolus vulgaris
Potri.005G210600 Populus trichocarpa
Pp3c21_19780 Physcomitrium patens
Prupe.8G239700 Prunus persica
Psat3g064000 Pisum sativum
PSO210G1690 Papaver somniferum
PSO761G0350 Papaver somniferum
QL03p020183 Quercus lobata
QL12p021397 Quercus lobata
RcHm_v2.0_Chr6g0290841 Rosa chinensis
Rhsim01G0274100 Rhododendron simsii
Sabra05G0160800 Salix brachista
Sc05g0005630 Simmondsia chinensis
Sed0001544 Sechium edule
SEGI_11361 Sequoiadendron giganteum
SGA_v2.0_scaffold81G26015 Striga asiatica
SHI31234 Sapria himalayana
SHI31236 Sapria himalayana
SMO356G0463 Selaginella moellendorffii
Solyc07g052050.2 Solanum lycopersicum
Solyc07g052190.1 Solanum lycopersicum
Solyc09g065280.4 Solanum lycopersicum
Sopen07g025610 Solanum pennellii
Sopen07g025690 Solanum pennellii
Sopen07g025700 Solanum pennellii
Sopen07g025830 Solanum pennellii
Sopen09g027030 Solanum pennellii
Sp1g02160 Schrenkiella parvula
Sp5g11480 Schrenkiella parvula
SpUn0083_0020 Schrenkiella parvula
TAR362G1079 Trochodendron aralioides
TAR365G1077 Trochodendron aralioides
THA.LOC104801242 Tarenaya hassleriana
THA.LOC104815940 Tarenaya hassleriana
Thecc.01G277300 Theobroma cacao
Thhalv10009621m.g Eutrema salsugineum
TPR.G9917 Trifolium pratense
TWI14G0518 Tripterygium wilfordii
vmacro14915 Vaccinium macrocarpon
VMungo1383G2933 Vigna mungo
Zm00001eb017440 Zea mays
Zm00001eb078380 Zea mays
Zm00001eb180190 Zea mays
Zm00001eb216840 Zea mays
Zm00001eb324990 Zea mays
Zm00001eb368520 Zea mays
Zm00001eb426800 Zea mays
Zm00001eb426810 Zea mays
Zm00001eb426820 Zea mays
Zm00001eb426830 Zea mays
Zm00001eb426850 Zea mays
Zm00001eb426860 Zea mays
Zm00001eb426870 Zea mays

User provided reference genes

Program Settings