Gene: Sopen07g025830
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g025830
- Transcript Identifier Sopen07g025830.1
- Gene Type Coding gene
- Location Spenn-ch07 : 71624379-71625227 : negative
Gene Family Information
- ID HOM05D004820
- #Genes/#Species 153/84
- Phylogenetic origin
- ID ORTHO05D005946
- #Genes/#Species 150/84
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen07g025830.1
Descriptions
- Description splicing factor Prp18 family protein | INVOLVED IN: RNA splicing | LOCATED IN: spliceosomal complex | EXPRESSED IN: male gametophyte, cultured cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Pre-mRNA processing factor 4 (PRP4) like , Splicing factor motif , Prp18 | BEST Arabidopsis thaliana protein match is: unknown protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008380 | IEA | InterPro | RNA splicing | |
GO:0000380 | ISO | PLAZA Integrative Orthology | alternative mRNA splicing, via spliceosome | AT1G03140 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005681 | IEA | InterPro | spliceosomal complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |