Gene: Zm00001eb216840
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb216840
- Transcript Identifier Zm00001eb216840_T001
- Gene Type Coding gene
- Location 5 : 12822344-12825220 : positive
Gene Family Information
- ID HOM05D004820
- #Genes/#Species 153/84
- Phylogenetic origin
- ID ORTHO05D005946
- #Genes/#Species 150/84
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb216840_T001
- pid Zm00001eb216840_P001
- uniprot A0A3L6EXY6
- uniprot A0A1D6GJX7
- entrez 103625968
- refseq XP_008644589.1
- refseq XM_008646367.1
- V4_identifier Zm00001d013489
Descriptions
- Description Zm00001e012232
- Description splicing factor Prp18 family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0008380 | IEA | InterPro | RNA splicing | |
| GO:0071048 | IBA | GOA Database | nuclear retention of unspliced pre-mRNA at the site of transcription | |
| GO:0000350 | IBA | GOA Database | generation of catalytic spliceosome for second transesterification step |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005681 | IEA | GOA Database | spliceosomal complex | |
| GO:0005681 | IEA | InterPro | spliceosomal complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0071021 | IBA | GOA Database | U2-type post-spliceosomal complex | |
| GO:0046540 | IBA | GOA Database | U4/U6 x U5 tri-snRNP complex | |
| GO:0005682 | IBA | GOA Database | U5 snRNP |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |