Gene: COL.COLO4_09079

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_09079
  • Transcript Identifier COL.rna7876
  • Gene Type Coding gene
  • Location AWUE01014114.1 : 49327-51777 : negative

Gene Family Information

  • ID HOM05D004820
  • #Genes/#Species 153/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna7876
  • GenBank OMP05057.1
  • id gene9051
  • gene_name COLO4_09079
  • uniprot A0A1R3KD85

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0008380
IEA
InterProRNA splicing
GO:0000380
ISO
PLAZA Integrative Orthologyalternative mRNA splicing, via spliceosome AT1G03140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014906 Pre-mRNA processing factor 4 (PRP4)-like
IPR039979 Pre-mRNA-splicing factor 18
IPR004098 Prp18
IPR036285 PRP4-like superfamily
Mapman id Description
35.1 not assigned.annotated