Gene: Sopen09g027030

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g027030
  • Transcript Identifier Sopen09g027030.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 74643525-74646895 : positive

Gene Family Information

  • ID HOM05D004820
  • #Genes/#Species 153/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g027030.1

Descriptions

  • Description splicing factor Prp18 family protein | INVOLVED IN: RNA splicing | LOCATED IN: spliceosomal complex | EXPRESSED IN: male gametophyte, cultured cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Pre-mRNA processing factor 4 (PRP4) like , Splicing factor motif , Prp18 | BEST Arabidopsis thaliana protein match is: unknown protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
IEA
InterProRNA splicing
GO:0000380
ISO
PLAZA Integrative Orthologyalternative mRNA splicing, via spliceosome AT1G03140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039979 Pre-mRNA-splicing factor 18
IPR014906 Pre-mRNA processing factor 4 (PRP4)-like
IPR004098 Prp18
IPR036285 PRP4-like superfamily
Mapman id Description
35.1 not assigned.annotated