Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07030 Brassica napus
A03p60590 Brassica napus
Aa31LG2G19110 Aethionema arabicum
Aa31LG2G19120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.692 Anthoceros agrestis
Actinidia21721 Actinidia chinensis
Actinidia32105 Actinidia chinensis
Actinidia32106 Actinidia chinensis
Ah.14g088390 Amaranthus hybridus
AL7G20870 Arabidopsis lyrata
Aqoxy3G03771 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.696W46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IIX4FM Arachis hypogaea
AT4G31210 Arabidopsis thaliana
ATR0691G178 Amborella trichopoda
Atru.chr7.2700 Acer truncatum
AUR62013317 Chenopodium quinoa
AUR62020658 Chenopodium quinoa
AUR62028071 Chenopodium quinoa
AUR62038716 Chenopodium quinoa
AUR62043895 Chenopodium quinoa
AUR62044451 Chenopodium quinoa
BcaC09g51903 Brassica carinata
BcaNung01535 Brassica carinata
BolC1t00764H Brassica oleracea
BolC7t46304H Brassica oleracea
BraA01t00655Z Brassica rapa
BraA03t15100Z Brassica rapa
C01p07770 Brassica napus
C07p58490 Brassica napus
CAN.G809.41 Capsicum annuum
CANSAT25G3238 Cannabis sativa
CANSAT54G0998 Cannabis sativa
CARHR239110 Cardamine hirsuta
Carub.0007s0933 Capsella rubella
Ca_01520_v3 Cicer arietinum L.
CBR_g22953 Chara braunii
Cc09_g04950 Coffea canephora
CDE02G2996 Ceratophyllum demersum
Cfa013296 Carpinus fangiana
Ciclev10007345m.g Citrus clementina
CiPaw.07G210600 Carya illinoinensis
ClCG05G026380 Citrullus lanatus
COL.COLO4_18648 Corchorus olitorius
Cpa.g.sc246.4 Carica papaya
Cpa.g.sc246.5 Carica papaya
Cre10.g442850 Chlamydomonas reinhardtii
CsaV3_3G047210 Cucumis sativus L.
CsaV3_3G047220 Cucumis sativus L.
CSS0004825 Camellia sinensis var. sinensis
CSS0018701 Camellia sinensis var. sinensis
CSS0024449 Camellia sinensis var. sinensis
CSS0030659 Camellia sinensis var. sinensis
CSS0037923 Camellia sinensis var. sinensis
DCAR_006332 Daucus carota
Dinv37488 Davidia involucrata
Dinv38803 Davidia involucrata
ECA234G1339 Erigeron canadensis
EL10Ac2g03676 Beta vulgaris
Eucgr.C02139 Eucalyptus grandis
FAN07G2862 Fragaria x ananassa
FAN20G0828 Fragaria x ananassa
FAN27G1482 Fragaria x ananassa
FvH4_2g36580 Fragaria vesca
Glyma.14G137100 Glycine max
Glyma.17G196400 Glycine max
Glyma.17G196500 Glycine max
Gohir.A06G108300 Gossypium hirsutum
Gohir.D06G110400 Gossypium hirsutum
Gorai.010G125500 Gossypium raimondii
GSVIVG01035576001 Vitis vinifera
HanXRQChr16g0521121 Helianthus annuus
Haze_21777 Corylus avellana
Haze_21778 Corylus avellana
Haze_21779 Corylus avellana
Hma1.2p1_0495F.1_g165690 Hydrangea macrophylla
Hma1.2p1_0534F.1_g173690 Hydrangea macrophylla
Hma1.2p1_0534F.1_g173700 Hydrangea macrophylla
Hma1.2p1_1265F.1_g271353 Hydrangea macrophylla
Hma1.2p1_1265F.1_g271356 Hydrangea macrophylla
HPP92_015554 Vanilla planifolia
Hund03258 Selenicereus undatus
Lalb_Chr22g0361201 Lupinus albus
Lj5g0011494 Lotus japonicus
Lj8C583T4 Lonicera japonica
Lsat_1_v5_gn_4_39420 Lactuca sativa
Manes.03G000450 Manihot esculenta
Mapoly0025s0095 Marchantia polymorpha
MBI16_g42310_MAGBIO Magnolia biondii
MCO03G359 Micromonas commoda
MCO16G139 Micromonas commoda
MD08G1125900 Malus domestica
MD15G1105700 Malus domestica
Medtr0229s0020 Medicago truncatula
Medtr0245s0010 Medicago truncatula
Medtr1g009315 Medicago truncatula
Medtr1g009570 Medicago truncatula
Medtr2g066840 Medicago truncatula
MELO3C003609.2 Cucumis melo
Migut.C00355 Erythranthe guttata
Migut.E00600 Erythranthe guttata
Nitab4.5_0000844g0320 Nicotiana tabacum
Nitab4.5_0011308g0020 Nicotiana tabacum
Nitab4.5_0011308g0040 Nicotiana tabacum
Nn4g23566 Nelumbo nucifera
Oeu005158.2 Olea europaea
Os02g0474300 Oryza sativa ssp. japonica
Os06g0281400 Oryza sativa ssp. japonica
Peaxi162Scf00036g01311 Petunia axillaris
PGSC0003DMG400012781 Solanum tuberosum
Phvul.002G181900 Phaseolus vulgaris
Potri.006G279700 Populus trichocarpa
Pp3c23_11430 Physcomitrium patens
Pp3c24_9990 Physcomitrium patens
PRCOL_00000349 Prasinoderma coloniale
Prupe.1G457500 Prunus persica
Psat6g033360 Pisum sativum
Psat6g033400 Pisum sativum
PSO017G1506 Papaver somniferum
PSO063G2748 Papaver somniferum
PSO478G3803 Papaver somniferum
PSO782G1701 Papaver somniferum
QL12p025652 Quercus lobata
RcHm_v2.0_Chr6g0305241 Rosa chinensis
Rhsim08G0228200 Rhododendron simsii
RhsimUnG0118700 Rhododendron simsii
Sabra06G0216700 Salix brachista
SalBow1G4849 Salvia bowleyana
SalBow1G6309 Salvia bowleyana
Sc10g0004210 Simmondsia chinensis
Sed0008341 Sechium edule
Sed0013871 Sechium edule
SEGI_38297 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21366 Striga asiatica
SHI21133 Sapria himalayana
SMO014G0004 Selaginella moellendorffii
SMO014G0037 Selaginella moellendorffii
SMO304G0055 Selaginella moellendorffii
Solyc02g081910.2 Solanum lycopersicum
Sopen02g026540 Solanum pennellii
Sp7g29090 Schrenkiella parvula
TAR629G0385 Trochodendron aralioides
THA.LOC104819919 Tarenaya hassleriana
Thecc.09G000400 Theobroma cacao
Thhalv10024242m.g Eutrema salsugineum
TPR.G12110 Trifolium pratense
TPR.G15425 Trifolium pratense
TPR.G20544 Trifolium pratense
TPR.G261 Trifolium pratense
TPR.G39482 Trifolium pratense
TWI63G0055 Tripterygium wilfordii
unitig_60.g25825 Utricularia gibba
vmacro18846 Vaccinium macrocarpon
vmacro20064 Vaccinium macrocarpon
VMungo0251G2701 Vigna mungo
VMungo0251G2783 Vigna mungo
VMungo0251G2915 Vigna mungo
Zm00001eb280820 Zea mays
Zm00001eb380580 Zea mays

User provided reference genes

Program Settings